RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, human

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BEST1-204	ENST00000524926	SLC22A23	A1A5C7	686 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	FABP12	A6NFH5	140 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926		G3V3Y1	287 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	SC5D	O75845	299 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	TGM1	P22735	817 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	MLF1	P58340	268 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	POU3F1	Q03052	451 aa	Predicted RBP	13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	ZP4	Q12836	540 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	ETFDH	Q16134	617 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	ZMAT1	Q5H9K5	638 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	TMEM164	Q5U3C3	297 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	SLC22A10	Q63ZE4	541 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	FAM131A	Q6UXB0	335 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	PLCZ1	Q86YW0	608 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	YIPF7	Q8N8F6	280 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	FADS6	Q8N9I5	356 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	POC5	Q8NA72	575 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	JSRP1	Q96MG2	331 aa	Predicted RBP	13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	SDHC	Q99643	169 aa	Predicted RBP	13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	CDC6	Q99741	560 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	VSX1	Q9NZR4	365 aa	Predicted RBP	13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.73	□□□□□ -0.21
BEST1-204	ENST00000524926		V9GYH0	126 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	FREM2	Q5SZK8	3169 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	GALR2	O43603	387 aa	Predicted RBP	13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	ICAM2	P13598	275 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	AZGP1	P25311	298 aa	Known RBP	13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	C19orf57	Q0VDD7	668 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	ZNF684	Q5T5D7	378 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	IDNK	Q5T6J7	187 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	CDCP2	Q5VXM1	449 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	KCTD20	Q7Z5Y7	419 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	PXK	Q7Z7A4	578 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	NR2C2AP	Q86WQ0	139 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	GNRHR2	Q96P88	292 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	OR5B2	Q96R09	309 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	SNX18	Q96RF0	628 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	ALKBH4	Q9NXW9	302 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	FOXJ2	Q9P0K8	574 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	MRM2	Q9UI43	246 aa	Known RBP	13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	ING1	Q9UK53	422 aa	Predicted RBP	13.73	□□□□□ -0.21
BEST1-204	ENST00000524926	TMEM14A	Q9Y6G1	99 aa		13.73	□□□□□ -0.21
BEST1-204	ENST00000524926		A0A1W2PNR3	127 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926		A0A1W2PNU3	283 aa	Predicted RBP	13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	ZNF593	O00488	134 aa	Predicted RBP	13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	KRT8	P05787	483 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	RAB40AL	P0C0E4	278 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	CTLA4	P16410	223 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	SFTPD	P35247	375 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	MADCAM1	Q13477	382 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	LIPN	Q5VXI9	398 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	MZT2A	Q6P582	158 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	SLC35D2	Q76EJ3	337 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	MINDY2	Q8NBR6	621 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	FRMD6	Q96NE9	622 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	CCDC32	Q9BV29	185 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	MED29	Q9NX70	200 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	ANKRD10	Q9NXR5	420 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	B3GALT5	Q9Y2C3	310 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	KNTC1	P50748	2209 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926		A0A1W2PQ72	361 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	HPGDS	O60760	199 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	ALOX5AP	P20292	161 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	EIF1	P41567	113 aa	Known RBP	13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	DAP3	P51398	398 aa	Known RBP	13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	NANOS3	P60323	173 aa	Known RBP	13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	PPP3R1	P63098	170 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	HSF1	Q00613	529 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	PAMR1	Q6UXH9	720 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	PAQR8	Q8TEZ7	354 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	OR14A2	Q96R54	314 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	MNT	Q99583	582 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	ANGPTL4	Q9BY76	406 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	KCNG2	Q9UJ96	466 aa		13.72	□□□□□ -0.21
BEST1-204	ENST00000524926	CCDC187	A0A096LP49	1063 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926		A6NIZ1	184 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	CFL1	P23528	166 aa	Known RBP	13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	CRABP1	P29762	137 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	BLVRA	P53004	296 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	OR10A3	P58181	314 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	RAP1B	P61224	184 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	RPS11	P62280	158 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	RAP1A	P62834	184 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926		Q0VFX4	171 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	ZNF79	Q15937	498 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	ZNF468	Q5VIY5	522 aa	Predicted RBP	13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	TPRA1	Q86W33	373 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	ASB10	Q8WXI3	467 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	HSD17B8	Q92506	261 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	TXNDC15	Q96J42	360 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	SPRY4	Q9C004	299 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	TIGAR	Q9NQ88	270 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	TBCCD1	Q9NVR7	557 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	RHBDL2	Q9NX52	303 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	SDK2	Q58EX2	2172 aa		13.71	□□□□□ -0.21
BEST1-204	ENST00000524926	IGLV1-36	A0A0B4J1U3	117 aa		13.71	□□□□□ -0.22
BEST1-204	ENST00000524926	HP	P00738	406 aa		13.71	□□□□□ -0.22
BEST1-204	ENST00000524926	CD1A	P06126	327 aa		13.71	□□□□□ -0.22
BEST1-204	ENST00000524926	SPARC	P09486	303 aa		13.71	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms