RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 PCYOX1LQ8NBM8 494 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 MFSD9Q8NBP5 474 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 TRPV3Q8NET8 790 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 NUP37Q8NFH4 326 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 OR7G1Q8NGA0 311 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 OR5M9Q8NGP3 310 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 OR5AR1Q8NGP9 310 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 OR6S1Q8NH40 331 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 JOSD2Q8TAC2 188 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 SPPL2AQ8TCT8 520 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 CHPT1Q8WUD6 406 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 KCTD4Q8WVF5 259 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 TMEM186Q96B77 213 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 SMIM10Q96HG1 83 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ALS2CR12Q96Q35 445 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 HBEGFQ99075 208 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 INPP5KQ9BT40 448 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 DPH7Q9BTV6 452 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 DOHHQ9BU89 302 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ZNF416Q9BWM5 594 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ITPAQ9BY32 194 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ACTR6Q9GZN1 396 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 STMN4Q9H169 189 aaPredicted RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 CDC42EP4Q9H3Q1 356 aaKnown RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 C16orf95Q9H693 158 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 NT5DC2Q9H857 520 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 MED20Q9H944 212 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 PROK2Q9HC23 129 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 Q9N2K0 584 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 MRPS30Q9NP92 439 aaKnown RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 NT5MQ9NPB1 228 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 NLE1Q9NVX2 485 aaPredicted RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 ANAPC11Q9NYG5 84 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 NKIRAS2Q9NYR9 191 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 PLEK2Q9NYT0 353 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 C6orf203Q9P0P8 240 aaPredicted RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 RWDD2AQ9UIY3 292 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ZNF223Q9UK11 482 aaPredicted RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 CELA1Q9UNI1 258 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 SNX10Q9Y5X0 201 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 AP4B1Q9Y6B7 739 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 PKHD1P08F94 4074 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 HUWE1Q7Z6Z7 4374 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 DSPPQ9NZW4 1301 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 ARHGAP21Q5T5U3 1957 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 A0A0A6YYC8 382 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 A0A0J9YVX5 310 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 TRBV11-1A0A0K0K1C0 115 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 ATP6AP2A0A1C7CYW4 349 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 TRBC2A0A5B9 178 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 SYCE3A1L190 88 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 PINLYPA6NC86 204 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 OR6C70A6NIJ9 312 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 OR6C65A6NJZ3 312 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 OR5H1A6NKK0 313 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 GJE1A6NN92 205 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 SRRM4A7MD48 611 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 FAM166BA8MTA8 275 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 RNASEK-C17orf49H0YIS7 233 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 I3L1I5 382 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 GFYI3L273 518 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 PSMD3O43242 534 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 XRCC3O43542 346 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 TRAF3IP2O43734 574 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 MFSD11O43934 449 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 GPRIN2O60269 458 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 MITFO75030 526 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 MTX2O75431 263 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 ATP6AP2O75787 350 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 BCAS2O75934 225 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 TSPAN9O75954 239 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 STAMBPO95630 424 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 HSPA4LO95757 839 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 AIFM1O95831 613 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CATP04040 527 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 MPC1LP0DKB6 136 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CCL3P10147 92 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 TCF4P15884 667 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 NT5EP21589 574 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 PSMA2P25787 234 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 GDF1P27539 372 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 PDHA2P29803 388 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 RBMXP38159 391 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 SOX3P41225 446 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 EIF1P41567 113 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 CASP3P42574 277 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 SLC1A1P43005 524 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 IDH3GP51553 393 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 GEMP55040 296 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 DSCR4P56555 118 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 MAXP61244 160 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CDKL1Q00532 357 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 RGS1Q08116 209 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 TGM3Q08188 693 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 TFDP2Q14188 446 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 DPYSL3Q14195 570 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 IRF3Q14653 427 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 PTPRCAPQ14761 206 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 EBPQ15125 230 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 TAB1Q15750 504 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms