RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 TRIB1Q96RU8 372 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 NMNAT2Q9BZQ4 307 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 ASF1BQ9NVP2 202 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 VSX1Q9NZR4 365 aaPredicted RBP19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 KLHL9Q9P2J3 617 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 ZNF175Q9Y473 711 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 FLVCR1Q9Y5Y0 555 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 FREM3P0C091 2139 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 IGHG1P01857 330 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 SPI1P17947 270 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 SLC25A1P53007 311 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 CDH15P55291 814 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 CLRN1P58418 232 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 PIGFQ07326 219 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 LGALS3BPQ08380 585 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 ZNF585AQ6P3V2 769 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 B3GLCTQ6Y288 498 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 AHSA2Q719I0 299 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 P4HA3Q7Z4N8 544 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 OR51L1Q8NGJ5 315 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 SGCDQ92629 289 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 RNFT2Q96EX2 444 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 KCNK17Q96T54 332 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 NUAK2Q9H093 628 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 PAK1IP1Q9NWT1 392 aaPredicted RBP19■□□□□ 0.63
R3HCC1-208ENST00000522012 BAHCC1Q9P281 2608 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 DSPP15924 2871 aaKnown RBP19■□□□□ 0.63
R3HCC1-208ENST00000522012 TTLL8A6PVC2 850 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 FAM171A2A8MVW0 826 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 AHRRA9YTQ3 701 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 AKAP8O43823 692 aaKnown RBP19■□□□□ 0.63
R3HCC1-208ENST00000522012 TGM6O95932 706 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 SLC2A5P22732 501 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 PYCR1P32322 319 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 MTNR1AP48039 350 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 TDGF1P3P51864 188 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 RNPS1Q15287 305 aaKnown RBP19■□□□□ 0.63
R3HCC1-208ENST00000522012 GTF2IRD2BQ6EKJ0 949 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 GTF2IRD2Q86UP8 949 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 OR6V1Q8N148 313 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 PROKR2Q8NFJ6 384 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 TSPAN14Q8NG11 270 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 OR2T4Q8NH00 348 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 IPCEF1Q8WWN9 437 aaPredicted RBP19■□□□□ 0.63
R3HCC1-208ENST00000522012 OR2M2Q96R28 347 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 TEAD3Q99594 435 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 ERVK-18Q9QC07 812 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 ING1Q9UK53 422 aaPredicted RBP19■□□□□ 0.63
R3HCC1-208ENST00000522012 CLEC4AQ9UMR7 237 aa19■□□□□ 0.63
R3HCC1-208ENST00000522012 IGKV3D-15A0A087WSY6 115 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 CCDC182A6NF36 153 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 EFCAB10A6NFE3 127 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 SLC22A31A6NKX4 558 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 GPR171O14626 319 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 SLC16A7O60669 478 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 TPOP07202 933 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 PGA4P0DJD7 388 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 PGA3P0DJD8 388 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 FCGR2AP12318 317 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 GABARAPL2P60520 117 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 AAED1Q7RTV5 226 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 NOXO1Q8NFA2 376 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 RBP7Q96R05 134 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 SLX1AQ9BQ83 275 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 COPS4Q9BT78 406 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 ALG12Q9BV10 488 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 MRPL13Q9BYD1 178 aaKnown RBP18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 DUSP21Q9H596 190 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 EMC3Q9P0I2 261 aa18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 WARS2Q9UGM6 360 aaKnown RBP18.99■□□□□ 0.63
R3HCC1-208ENST00000522012 DCTN6O00399 190 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 AHCYL1O43865 530 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 APOL3O95236 402 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 ABOP16442 354 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 ATP6V1E1P36543 226 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 SLC15A1P46059 708 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 CENPAP49450 140 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 SELENOPP49908 381 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 SLC35A2P78381 396 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 ADGRE4PQ86SQ3 457 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 TUSC5Q8IXB3 177 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 STX19Q8N4C7 294 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 OR6K6Q8NGW6 343 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 ZNRF4Q8WWF5 429 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 MYDGFQ969H8 173 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 ZMYND19Q96E35 227 aaPredicted RBP18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 CCDC90BQ9GZT6 254 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 CALHM2Q9HA72 323 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 CNOT2Q9NZN8 540 aaKnown RBP18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 CLCF1Q9UBD9 225 aa18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 NOSIPQ9Y314 301 aaKnown RBP18.98■□□□□ 0.63
R3HCC1-208ENST00000522012 CRABP1P29762 137 aa18.97■□□□□ 0.63
R3HCC1-208ENST00000522012 GSTT1P30711 240 aa18.97■□□□□ 0.63
R3HCC1-208ENST00000522012 FMODQ06828 376 aa18.97■□□□□ 0.63
R3HCC1-208ENST00000522012 ST3GAL4Q11206 333 aa18.97■□□□□ 0.63
R3HCC1-208ENST00000522012 TMED1Q13445 227 aa18.97■□□□□ 0.63
R3HCC1-208ENST00000522012 SF3B4Q15427 424 aaKnown RBP eCLIP18.97■□□□□ 0.63
R3HCC1-208ENST00000522012 KLHL22Q53GT1 634 aa18.97■□□□□ 0.63
R3HCC1-208ENST00000522012 SLC35D3Q5M8T2 416 aa18.97■□□□□ 0.63
R3HCC1-208ENST00000522012 LCN1P1Q5VSP4 162 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms