RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 ERVK-25P63136 954 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 TGM3Q08188 693 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 MPPED2Q15777 294 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 RNASEKQ6P5S7 137 aaKnown RBP3.13□□□□□ -1.91
PTPN12-214ENST00000520947 TRIM40Q6P9F5 258 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 CLEC2AQ6UVW9 174 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 LUZP2Q86TE4 346 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 MKXQ8IYA7 352 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 OR2L3Q8NG85 312 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 OR4F6Q8NGB9 312 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 FAM81AQ8TBF8 368 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 ZNF75CPQ92670 426 aaPredicted RBP3.13□□□□□ -1.91
PTPN12-214ENST00000520947 ZNF799Q96GE5 643 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 OR8B4Q96RC9 309 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 C11orf70Q9BRQ4 267 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 IQCGQ9H095 443 aaKnown RBP3.13□□□□□ -1.91
PTPN12-214ENST00000520947 RANBP3Q9H6Z4 567 aaPredicted RBP3.13□□□□□ -1.91
PTPN12-214ENST00000520947 TMEM185BQ9H7F4 350 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 FANCEQ9HB96 536 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 ZNF331Q9NQX6 463 aaPredicted RBP3.13□□□□□ -1.91
PTPN12-214ENST00000520947 PISDQ9UG56 409 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 TRAPPC4Q9Y296 219 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 FANCIQ9NVI1 1328 aa3.13□□□□□ -1.91
PTPN12-214ENST00000520947 SCN2AQ99250 2005 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 SMCO3A2RU48 225 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 A6NDX4 124 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 CST1P01037 141 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 ALDOBP05062 364 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 FGF1P05230 155 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 STAG3L3P0CL85 134 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 PSG2P11465 335 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 TDGF1P13385 188 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 CRISP2P16562 243 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 KITLGP21583 273 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 VHLP40337 213 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 YAP1P46937 504 aaKnown RBP3.12□□□□□ -1.91
PTPN12-214ENST00000520947 TDGF1P3P51864 188 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 UCNP55089 124 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 IRX3P78415 501 aaPredicted RBP3.12□□□□□ -1.91
PTPN12-214ENST00000520947 ZNF658BQ4V348 819 aaPredicted RBP3.12□□□□□ -1.91
PTPN12-214ENST00000520947 LRRC10Q5BKY1 277 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 KHDRBS2Q5VWX1 349 aaKnown RBP3.12□□□□□ -1.91
PTPN12-214ENST00000520947 C19orf35Q6ZS72 473 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 TMCO2Q7Z6W1 182 aaPredicted RBP3.12□□□□□ -1.91
PTPN12-214ENST00000520947 Q8N9W7 124 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 VN1R2Q8NFZ6 395 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 NPBQ8NG41 125 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 OR52K1Q8NGK4 314 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 STARD8Q92502 1023 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 RNF185Q96GF1 192 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 SORT1Q99523 831 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 CENPKQ9BS16 269 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 XCL2Q9UBD3 114 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 CHTOPQ9Y3Y2 248 aaKnown RBP3.12□□□□□ -1.91
PTPN12-214ENST00000520947 N6AMT1Q9Y5N5 214 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 MROH5Q6ZUA9 1318 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 CDHR2Q9BYE9 1310 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 NINLQ9Y2I6 1382 aa3.12□□□□□ -1.91
PTPN12-214ENST00000520947 SPECC1L-ADORA2AF8WAN1 911 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 BOLA2-SMG1P6H3BVE0 249 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 TMEM50AO95807 157 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 IGHV2-5P01817 119 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 HOXC4P09017 264 aaPredicted RBP3.11□□□□□ -1.91
PTPN12-214ENST00000520947 CT62P0C5K7 136 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 RALBP11234 206 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 ZNF32P17041 273 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 CHMLP26374 656 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 HNRNPH3P31942 346 aaKnown RBP3.11□□□□□ -1.91
PTPN12-214ENST00000520947 ATP5C1P36542 298 aaKnown RBP3.11□□□□□ -1.91
PTPN12-214ENST00000520947 MAGEA1P43355 309 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 NPBWR2P48146 333 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 LHX2P50458 406 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 ENPEPQ07075 957 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 SPAG1Q07617 926 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 MERTKQ12866 999 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 FZD2Q14332 565 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 PSG5Q15238 335 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 CYB5R2Q6BCY4 276 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 FRMPD2BQ6IN97 320 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 LCN12Q6JVE5 192 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 CNIH2Q6PI25 160 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 LRRC74BQ6ZQY2 392 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 ZNF621Q6ZSS3 439 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 SLC25A48Q6ZT89 311 aaKnown RBP3.11□□□□□ -1.91
PTPN12-214ENST00000520947 GTPBP8Q8N3Z3 284 aaPredicted RBP3.11□□□□□ -1.91
PTPN12-214ENST00000520947 ZADH2Q8N4Q0 377 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 COMMD1Q8N668 190 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 OR4F15Q8NGB8 312 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 BLOC1S5Q8TDH9 187 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 TMEM158Q8WZ71 300 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 SLC38A4Q969I6 547 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 PKNOX2Q96KN3 472 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 HSFY1Q96LI6 401 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 TGS1Q96RS0 853 aaKnown RBP3.11□□□□□ -1.91
PTPN12-214ENST00000520947 MFFQ9GZY8 342 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 ILKAPQ9H0C8 392 aaPredicted RBP3.11□□□□□ -1.91
PTPN12-214ENST00000520947 CLMPQ9H6B4 373 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 AUNIPQ9H7T9 357 aa3.11□□□□□ -1.91
PTPN12-214ENST00000520947 RPRD1BQ9NQG5 326 aaKnown RBP3.11□□□□□ -1.91
PTPN12-214ENST00000520947 SLC25A37Q9NYZ2 338 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms