RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 C20orf196Q8IYI0 205 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 DHRSXQ8N5I4 330 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 NOXO1Q8NFA2 376 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 OR4K13Q8NH42 304 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 TMEM54Q969K7 222 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 CCDC120Q96HB5 630 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 SLC38A2Q96QD8 506 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 KCNK17Q96T54 332 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 PITX2Q99697 317 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 ALG12Q9BV10 488 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 LINC00470Q9BZP3 86 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 PIGMQ9H3S5 423 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 CMC2Q9NRP2 79 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 FOXD3Q9UJU5 478 aaPredicted RBP15.75■□□□□ 0.11
SDC2-205ENST00000520233 NDRG4Q9ULP0 352 aaKnown RBP15.75■□□□□ 0.11
SDC2-205ENST00000520233 PROCRQ9UNN8 238 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 RNF6Q9Y252 685 aa15.75■□□□□ 0.11
SDC2-205ENST00000520233 LOC100130705A0A1B0GUX0 176 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 PRSS37A4D1T9 235 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 RIIAD1A6NNX1 92 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 H0YAE9 185 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 SURF4O15260 269 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 IFNGP01579 166 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 NR2C1P13056 603 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 EDNRAP25101 427 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 GGT2P36268 569 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 CDKN2AP42771 156 aaKnown RBP15.74■□□□□ 0.11
SDC2-205ENST00000520233 CSNK1A1P48729 337 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 CLRN1P58418 232 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 KEAP1Q14145 624 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 HIST3H3Q16695 136 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 TSPO2Q5TGU0 170 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 TTC23Q5W5X9 447 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 TFAP2EQ6VUC0 442 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 PTCHD4Q6ZW05 846 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.74■□□□□ 0.11
SDC2-205ENST00000520233 CCDC71Q8IV32 467 aaPredicted RBP15.74■□□□□ 0.11
SDC2-205ENST00000520233 POMGNT2Q8NAT1 580 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 OR52E2Q8NGJ4 325 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 OR6N1Q8NGY5 312 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 FNDC8Q8TC99 324 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 ADI1Q9BV57 179 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 SLCO5A1Q9H2Y9 848 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 TVP23BQ9NYZ1 205 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 VSX1Q9NZR4 365 aaPredicted RBP15.74■□□□□ 0.11
SDC2-205ENST00000520233 ERRFI1Q9UJM3 462 aaPredicted RBP15.74■□□□□ 0.11
SDC2-205ENST00000520233 SLC5A6Q9Y289 635 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 GMPPBQ9Y5P6 360 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 DOCK7Q96N67 2140 aa15.74■□□□□ 0.11
SDC2-205ENST00000520233 MED12LQ86YW9 2145 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 SLC22A23A1A5C7 686 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 DVL2O14641 736 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 SLC2A10O95528 541 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 CNOT4O95628 575 aaKnown RBP15.73■□□□□ 0.11
SDC2-205ENST00000520233 RENP00797 406 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 HSPA13P48723 471 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 CDC42P60953 191 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 ADARB1P78563 741 aaKnown RBP15.73■□□□□ 0.11
SDC2-205ENST00000520233 SNAPC1Q16533 368 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 FBXW9Q5XUX1 488 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 LEG1Q6P5S2 330 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 LIX1LQ8IVB5 337 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 GPR137CQ8N3F9 429 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 SLC37A3Q8NCC5 494 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 NPEPL1Q8NDH3 523 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 CYGBQ8WWM9 190 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 ASB5Q8WWX0 329 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 NMD3Q96D46 503 aaKnown RBP15.73■□□□□ 0.11
SDC2-205ENST00000520233 PLEKHA8Q96JA3 519 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 NMNAT3Q96T66 252 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 DDOQ99489 341 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 B3GAT2Q9NPZ5 323 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 SLC7A10Q9NS82 523 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 GLTPQ9NZD2 209 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 COQ3Q9NZJ6 369 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 PRSS50Q9UI38 385 aa15.73■□□□□ 0.11
SDC2-205ENST00000520233 ZFYVE26Q68DK2 2539 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 H7C1C5 153 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 MSTNO14793 375 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 UPK3AO75631 287 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 SMNDC1O75940 238 aaKnown RBP eCLIP15.72■□□□□ 0.11
SDC2-205ENST00000520233 ZNF3P17036 446 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 BMP5P22003 454 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 CHRNB4P30926 498 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 CAPGP40121 348 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 PCYT1AP49585 367 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 LCN6P62502 163 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 EFNB1P98172 346 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 CD47Q08722 323 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 ITGADQ13349 1161 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 CRMP1Q14194 572 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 PHYHD1Q5SRE7 291 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 THEM4Q5T1C6 240 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 UBE2J2Q8N2K1 259 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 ZNF610Q8N9Z0 462 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 SYT14Q8NB59 555 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 SDR9C7Q8NEX9 313 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 TFAP2CQ92754 450 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 RBP7Q96R05 134 aa15.72■□□□□ 0.11
SDC2-205ENST00000520233 OPN3Q9H1Y3 402 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms