RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 TNFRSF11BO00300 401 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 ACOT8O14734 319 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 PLAUP00749 431 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 RAF1P04049 648 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 TSPAN19P0C672 248 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 PGA4P0DJD7 388 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 PGA3P0DJD8 388 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 B4GALT1P15291 398 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 ACADSP16219 412 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 IFNGR2P38484 337 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 MAGEA2P43356 314 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 OMPP47874 163 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 MYBPC1Q00872 1141 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 CD47Q08722 323 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 ZBED5Q49AG3 693 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 ZNF813Q6ZN06 617 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 ALPK2Q86TB3 2170 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 AQP12AQ8IXF9 295 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 PIAS4Q8N2W9 510 aaPredicted RBP12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 SYT14Q8NB59 555 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 KBTBD8Q8NFY9 601 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 BCL2L2Q92843 193 aaPredicted RBP12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 TMEM54Q969K7 222 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 CADM1Q9BY67 442 aaKnown RBP12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 TXNIPQ9H3M7 391 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 OBP2BQ9NPH6 170 aa12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 CCM2LQ9NUG4 571 aaPredicted RBP12.75□□□□□ -0.37
TOP1MT-203ENST00000517857 RAI1Q7Z5J4 1906 aaPredicted RBP12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 DHRS12A0PJE2 317 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 DPRXA6NFQ7 191 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 UNC119BA6NIH7 251 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 NPIPB13A6NJU9 1138 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 NPIPB4C9JG80 1138 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 ABCD4O14678 606 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 GSC2O15499 205 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 TRMUO75648 421 aaKnown RBP12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 KRT36O76013 467 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 NDUFB2O95178 105 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 RAP2AP10114 183 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 ACVR1BP36896 505 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 LIMS1P48059 325 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 ERFP50548 548 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 RPL27P61353 136 aaKnown RBP12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 ERVK-25P63136 954 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 RUNX1T1Q06455 604 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 PGM2L1Q6PCE3 622 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 FANK1Q8TC84 345 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 MAGEE2Q8TD90 523 aaPredicted RBP12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 TSPAN32Q96QS1 320 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 FOXB1Q99853 325 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 FUZQ9BT04 418 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 KATNB1Q9BVA0 655 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 NELFAQ9H3P2 528 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 REEP1Q9H902 201 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 POU2F3Q9UKI9 436 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 POMPQ9Y244 141 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 LYVE1Q9Y5Y7 322 aa12.74□□□□□ -0.37
TOP1MT-203ENST00000517857 ARPC4-TTLL3A0A0A6YYG9 625 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 A6NIZ1 184 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 CENPBD1B2RD01 187 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 DHHO43323 396 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 CCNB2O95067 398 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 IGHMP01871 453 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 QDPRP09417 244 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 NR2C1P13056 603 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 PTAFRP25105 342 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 CD40P25942 277 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 ZNF84P51523 738 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 CDH11P55287 796 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 RAP1BP61224 184 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 RAP1AP62834 184 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 SPOCK1Q08629 439 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 FHL1Q13642 323 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 ARMC4Q5T2S8 1044 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 C1QTNF12Q5T7M4 302 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 FAM205BPQ63HN1 556 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 OR2T5Q6IEZ7 315 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 SLC22A25Q6T423 547 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 C20orf204Q6ZNR8 217 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 CCDC121Q6ZUS5 278 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 ADGRG5Q8IZF4 528 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 LRRC75AQ8NAA5 344 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 OR2T29Q8NH02 315 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 NANOS1Q8WY41 292 aaKnown RBP12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 HDAC2Q92769 488 aaKnown RBP12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 NINJ1Q92982 152 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 RADILQ96JH8 1075 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 ZNF570Q96NI8 536 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 CCL19Q99731 98 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 KCNS3Q9BQ31 491 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 TMEM204Q9BSN7 226 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 GRHPRQ9UBQ7 328 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 SLC7A8Q9UHI5 535 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 ZNF346Q9UL40 294 aaKnown RBP12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 MGAT4BQ9UQ53 548 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 SIGLEC7Q9Y286 467 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 SAMHD1Q9Y3Z3 626 aaKnown RBP12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 U3KQV3 271 aa12.73□□□□□ -0.37
TOP1MT-203ENST00000517857 HEATR1Q9H583 2144 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms