RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CHMP1AQ9HD42 196 aaPredicted RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 PNO1Q9NRX1 252 aaKnown RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 TM7SF3Q9NS93 570 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ZFP57Q9NU63 452 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 HRASLS2Q9NWW9 162 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 COPS7AQ9UBW8 275 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 A0A0B4J2A0 478 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 SLC22A23A1A5C7 686 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 HSPB2A8KAH6 182 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 TMEM229AB2RXF0 380 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 HCRTR2O43614 444 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 RDH16O75452 317 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 HOXD4P09016 255 aaPredicted RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 AKT2P31751 481 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 P2RY2P41231 377 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 IL10RAQ13651 578 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 EIF2B1Q14232 305 aaKnown RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 HSPB2Q16082 182 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 FAM74A1Q5RGS3 127 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ASTLQ6HA08 431 aaPredicted RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ZNF793Q6ZN11 406 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ADGRE4PQ86SQ3 457 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 OR4D9Q8NGE8 314 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 OR10Z1Q8NGY1 313 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 RASD2Q96D21 266 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ZG16BQ96DA0 208 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 WDR92Q96MX6 357 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 GPR174Q9BXC1 333 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ZNF768Q9H5H4 540 aaKnown RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 UNKLQ9H9P5 680 aaKnown RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 SHPKQ9UHJ6 478 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 OPN4Q9UHM6 478 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 SIRT4Q9Y6E7 314 aaPredicted RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 RAB19A4D1S5 217 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 E9PQ18 207 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 SOX1O00570 391 aaPredicted RBP6.1□□□□□ -1.43
CPNE3-203ENST00000517490 RAD1O60671 282 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 RNGTTO60942 597 aaKnown RBP6.1□□□□□ -1.43
CPNE3-203ENST00000517490 CD3DP04234 171 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 CRABP1P29762 137 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 NTHL1P78549 312 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 DOC2BQ14184 412 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 CHRFAM7AQ494W8 412 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 NHLRC3Q5JS37 347 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 RGS7BPQ6MZT1 257 aaPredicted RBP6.1□□□□□ -1.43
CPNE3-203ENST00000517490 TRAPPC6BQ86SZ2 158 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 MUC20Q8N307 709 aaPredicted RBP6.1□□□□□ -1.43
CPNE3-203ENST00000517490 OR2A1Q8NGT9 310 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 S100PBPQ96BU1 408 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 C1QTNF6Q9BXI9 259 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 SLC17A9Q9BYT1 436 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 SEMA4CQ9C0C4 833 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 CRISPLD2Q9H0B8 497 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 PRDM7Q9NQW5 492 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 RNF186Q9NXI6 227 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 NTMQ9P121 344 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 OR5V1Q9UGF6 321 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 CA5BQ9Y2D0 317 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 KCNIP3Q9Y2W7 256 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 WIF1Q9Y5W5 379 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 ANKRD36A6QL64 1941 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 SBF1O95248 1867 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 TCRBV16S1A1N1A0A5B0 115 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 MED6O75586 246 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 CXCL2P19875 107 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 PGCP20142 388 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 SLC6A8P48029 635 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 CAMLGP49069 296 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 ZNF616Q08AN1 781 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 PRSS53Q2L4Q9 553 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 TRMT12Q53H54 448 aaKnown RBP6.1□□□□□ -1.43
CPNE3-203ENST00000517490 USP53Q70EK8 1073 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 RTL10Q7L3V2 364 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 DPY19L4Q7Z388 723 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 AMER3Q8N944 861 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 HERVK_113Q902F9 699 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 CCNL2Q96S94 520 aaPredicted RBP6.1□□□□□ -1.43
CPNE3-203ENST00000517490 SULT4A1Q9BR01 284 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 MS4A7Q9GZW8 240 aaPredicted RBP6.1□□□□□ -1.43
CPNE3-203ENST00000517490 LYRM4Q9HD34 91 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 PCDHGA9Q9Y5G4 932 aaKnown RBP6.1□□□□□ -1.43
CPNE3-203ENST00000517490 ENTPD2Q9Y5L3 495 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 PLXNB2O15031 1838 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 SERINC4A6NH21 518 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 AGPAT2O15120 278 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 PPM1DO15297 605 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 CBX7O95931 251 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 NAGAP17050 411 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 HOXA1P49639 335 aaPredicted RBP6.1□□□□□ -1.43
CPNE3-203ENST00000517490 ACTBL2Q562R1 376 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 FCRL6Q6DN72 434 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 PAPD4Q6PIY7 484 aaKnown RBP6.1□□□□□ -1.43
CPNE3-203ENST00000517490 MFSD8Q8NHS3 518 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 APOBEC4Q8WW27 367 aaKnown RBP6.1□□□□□ -1.43
CPNE3-203ENST00000517490 ORAI1Q96D31 301 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 DCBLD2Q96PD2 775 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 NPAS1Q99742 590 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 GDF15Q99988 308 aa6.1□□□□□ -1.43
CPNE3-203ENST00000517490 TSPAN10Q9H1Z9 355 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms