RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 MT-ND1P03886 318 aa15.3■□□□□ 0.04
SIL1-215ENST00000515008 NPR2P20594 1047 aa15.3■□□□□ 0.04
SIL1-215ENST00000515008 YLPM1P49750 1951 aaKnown RBP15.3■□□□□ 0.04
SIL1-215ENST00000515008 VLDLRP98155 873 aa15.3■□□□□ 0.04
SIL1-215ENST00000515008 GUCY1A3Q02108 690 aa15.3■□□□□ 0.04
SIL1-215ENST00000515008 TMEM249Q2WGJ8 235 aa15.3■□□□□ 0.04
SIL1-215ENST00000515008 DEF8Q6ZN54 512 aa15.3■□□□□ 0.04
SIL1-215ENST00000515008 WDFY1Q8IWB7 410 aa15.3■□□□□ 0.04
SIL1-215ENST00000515008 NOX3Q9HBY0 568 aa15.3■□□□□ 0.04
SIL1-215ENST00000515008 MEPEQ9NQ76 525 aaPredicted RBP15.3■□□□□ 0.04
SIL1-215ENST00000515008 CENPBD1B2RD01 187 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 hCG_2039718K7EN88 272 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 OR7A10O76100 309 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 RAB36O95755 333 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 BCL10O95999 233 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 IGHG1P01857 330 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 ERCC1P07992 297 aaPredicted RBP15.29■□□□□ 0.04
SIL1-215ENST00000515008 ZNF14P17017 642 aaPredicted RBP15.29■□□□□ 0.04
SIL1-215ENST00000515008 KDELR2P33947 212 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 THBS4P35443 961 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 SF3A3Q12874 501 aaKnown RBP eCLIP15.29■□□□□ 0.04
SIL1-215ENST00000515008 SNTB2Q13425 540 aaKnown RBP15.29■□□□□ 0.04
SIL1-215ENST00000515008 DAG1Q14118 895 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 LRRC23Q53EV4 343 aaPredicted RBP15.29■□□□□ 0.04
SIL1-215ENST00000515008 CYBRD1Q53TN4 286 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 DPPA2Q7Z7J5 298 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 MICU2Q8IYU8 434 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 LRRC17Q8N6Y2 441 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 RP9Q8TA86 221 aaKnown RBP15.29■□□□□ 0.04
SIL1-215ENST00000515008 TMEM239Q8WW34 195 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 SGTBQ96EQ0 304 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 ZNF75AQ96N20 296 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 VRK1Q99986 396 aaPredicted RBP15.29■□□□□ 0.04
SIL1-215ENST00000515008 PIMREGQ9BSJ6 248 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 RAB1BQ9H0U4 201 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 YAE1D1Q9NRH1 226 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 ZNF224Q9NZL3 707 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 STX18Q9P2W9 335 aaKnown RBP15.29■□□□□ 0.04
SIL1-215ENST00000515008 RIMS3Q9UJD0 308 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 SPEF1Q9Y4P9 236 aa15.29■□□□□ 0.04
SIL1-215ENST00000515008 LOC390937A0A1W2PQ73 354 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 A0A1W2PRG6 482 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 ELOVL7A1L3X0 281 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 HTR3EA5X5Y0 456 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 A8MV72 311 aaPredicted RBP15.28■□□□□ 0.04
SIL1-215ENST00000515008 FARS2O95363 451 aaKnown RBP15.28■□□□□ 0.04
SIL1-215ENST00000515008 PGA4P0DJD7 388 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 PGA3P0DJD8 388 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 TNFRSF1BP20333 461 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 USF1P22415 310 aaPredicted RBP15.28■□□□□ 0.04
SIL1-215ENST00000515008 NR4A1P22736 598 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 IFNA8P32881 189 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 PTDSS1P48651 473 aaKnown RBP15.28■□□□□ 0.04
SIL1-215ENST00000515008 UGT2B15P54855 530 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 RPS23P62266 143 aaKnown RBP15.28■□□□□ 0.04
SIL1-215ENST00000515008 MELKQ14680 651 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 NRN1LQ496H8 165 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 C6orf52Q5T4I8 152 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 SPATA21Q7Z572 469 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 NKAIN4Q8IVV8 208 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 TMEM255BQ8WV15 326 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 LIPHQ8WWY8 451 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 LZICQ8WZA0 190 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 RCN3Q96D15 328 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 CMAHPQ9Y471 501 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 RTTNQ86VV8 2226 aa15.28■□□□□ 0.04
SIL1-215ENST00000515008 NPIPB13A6NJU9 1138 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 VWC2LB2RUY7 222 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 NPIPB4C9JG80 1138 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 MCIDASD6RGH6 385 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 BLOC1S5-TXNDC5H3BN57 136 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 DHHO43323 396 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 GPRIN2O60269 458 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 LY6HO94772 140 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 OR8G3PP0DMU2 310 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 ZNF35P13682 527 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 FUT1P19526 365 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 LSP1P33241 339 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 GIPRP48546 466 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 EVX1P49640 407 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 DAP3P51398 398 aaKnown RBP15.27■□□□□ 0.04
SIL1-215ENST00000515008 RAB1AP62820 205 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 RPL18Q07020 188 aaKnown RBP15.27■□□□□ 0.04
SIL1-215ENST00000515008 ST3GAL3Q11203 375 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 PIN1Q13526 163 aaPredicted RBP15.27■□□□□ 0.04
SIL1-215ENST00000515008 KRT80Q6KB66 452 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 HIPK1Q86Z02 1210 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 SLC22A24Q8N4F4 322 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 ANKS4BQ8N8V4 417 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 NOXO1Q8NFA2 376 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 PFN4Q8NHR9 129 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 NEU4Q8WWR8 484 aaPredicted RBP15.27■□□□□ 0.04
SIL1-215ENST00000515008 MS4A3Q96HJ5 214 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 PRRC1Q96M27 445 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 SEPHS2Q99611 448 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 DOK1Q99704 481 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 TMEM38BQ9NVV0 291 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 ARMCX1Q9P291 453 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 MED31Q9Y3C7 131 aa15.27■□□□□ 0.04
SIL1-215ENST00000515008 ANK3Q12955 4377 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms