RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 NPAP1Q9NZP6 1156 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 SIGLEC7Q9Y286 467 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 POFUT2Q9Y2G5 429 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 FBN2P35556 2912 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 APCP25054 2843 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 TRMUO75648 421 aaKnown RBP12.22□□□□□ -0.45
USP46-209ENST00000514536 SEC14L2O76054 403 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 PLAUP00749 431 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 IGHG1P01857 330 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 PGA4P0DJD7 388 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 PGA3P0DJD8 388 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 HOXC12P31275 282 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 RPL4P36578 427 aaKnown RBP12.22□□□□□ -0.45
USP46-209ENST00000514536 ACVR1BP36896 505 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 ZNF83P51522 516 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 NR1H2P55055 460 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 SH3BGRP55822 239 aaPredicted RBP12.22□□□□□ -0.45
USP46-209ENST00000514536 CLRN1P58418 232 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 RPL27P61353 136 aaKnown RBP12.22□□□□□ -0.45
USP46-209ENST00000514536 ERVK-25P63136 954 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 TAF11Q15544 211 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 NCMAPQ5T1S8 102 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 KLHL24Q6TFL4 600 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 SSX8Q7RTT4 187 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 SYT14Q8NB59 555 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 OR4C15Q8NGM1 316 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 MRPL13Q9BYD1 178 aaKnown RBP12.22□□□□□ -0.45
USP46-209ENST00000514536 MMADHCQ9H3L0 296 aaPredicted RBP12.22□□□□□ -0.45
USP46-209ENST00000514536 ESRP2Q9H6T0 727 aaKnown RBP12.22□□□□□ -0.45
USP46-209ENST00000514536 PLEKHF2Q9H8W4 249 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 VNN3Q9NY84 501 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 AMDHD2Q9Y303 409 aa12.22□□□□□ -0.45
USP46-209ENST00000514536 DCHS2Q6V1P9 2916 aa12.21□□□□□ -0.45
USP46-209ENST00000514536 ABCA4P78363 2273 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 TCRBV3S1A0A5B6 114 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 ZNF99A8MXY4 864 aaPredicted RBP12.21□□□□□ -0.46
USP46-209ENST00000514536 EBAG9O00559 213 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 WNT11O96014 354 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 QDPRP09417 244 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 IFNGR2P38484 337 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 UBE2NP61088 152 aaKnown RBP12.21□□□□□ -0.46
USP46-209ENST00000514536 TUBA1BP68363 451 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 TUBA4AP68366 448 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 MYBPC1Q00872 1141 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 PGBD2Q6P3X8 592 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 TUBA1AQ71U36 451 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 HDDC2Q7Z4H3 204 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 GNPDA2Q8TDQ7 276 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 HDAC2Q92769 488 aaKnown RBP12.21□□□□□ -0.46
USP46-209ENST00000514536 TSPAN32Q96QS1 320 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 KATNB1Q9BVA0 655 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 NELFAQ9H3P2 528 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 REEP1Q9H902 201 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 IL20RAQ9UHF4 553 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 SAMHD1Q9Y3Z3 626 aaKnown RBP12.21□□□□□ -0.46
USP46-209ENST00000514536 U3KQV3 271 aa12.21□□□□□ -0.46
USP46-209ENST00000514536 NPIPB13A6NJU9 1138 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 NPIPB4C9JG80 1138 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 M0R1B8 84 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 DHHO43323 396 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 CCNB2O95067 398 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 NDUFB2O95178 105 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 CST1P01037 141 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 IGHMP01871 453 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 CD3EP07766 207 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 HOXB1P14653 301 aaPredicted RBP12.2□□□□□ -0.46
USP46-209ENST00000514536 FXYD6P3P58550 94 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 BSPH1Q075Z2 132 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 HIST3H3Q16695 136 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 C1orf94Q6P1W5 598 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 THSD4Q6ZMP0 1018 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 ZNF813Q6ZN06 617 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 ZNF704Q6ZNC4 412 aaPredicted RBP12.2□□□□□ -0.46
USP46-209ENST00000514536 ASRGL1Q7L266 308 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 NOXO1Q8NFA2 376 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 OR9Q2Q8NGE9 314 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 MAGEE2Q8TD90 523 aaPredicted RBP12.2□□□□□ -0.46
USP46-209ENST00000514536 MCHR2Q969V1 340 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 NDEL1Q9GZM8 345 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 OBP2BQ9NPH6 170 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 STX18Q9P2W9 335 aaKnown RBP12.2□□□□□ -0.46
USP46-209ENST00000514536 GRHPRQ9UBQ7 328 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 ADAM18Q9Y3Q7 739 aa12.2□□□□□ -0.46
USP46-209ENST00000514536 CENPBD1B2RD01 187 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 GNGT2O14610 69 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 ARHGEF9O43307 516 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 FKBP6O75344 327 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 GASTP01350 101 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 CD14P08571 375 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 B4GALT1P15291 398 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 FPR3P25089 353 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 GSSP48637 474 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 C1orf146Q5VVC0 180 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 KLHL17Q6TDP4 642 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 LINC00471Q8N535 108 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 ARIH2OSQ8N7S6 290 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 ZNF519Q8TB69 540 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 SLCO4A1Q96BD0 722 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 Q96M85 177 aa12.19□□□□□ -0.46
USP46-209ENST00000514536 FOXB1Q99853 325 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms