RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 GLIPR1L2Q4G1C9 344 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 SPRNQ5BIV9 151 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 ARMCX4Q5H9R4 360 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 CEP85LQ5SZL2 805 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 RNF220Q5VTB9 566 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 ATG16L1Q676U5 607 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 OLFML2AQ68BL7 652 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 NXNQ6DKJ4 435 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 C17orf107Q6ZR85 190 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 RETREG3Q86VR2 466 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 TREML1Q86YW5 311 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 ZNF584Q8IVC4 421 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 TMEM123Q8N131 208 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 PAQR4Q8N4S7 273 aaPredicted RBP9.46□□□□□ -0.9
RNF4-218ENST00000513284 PNPT1Q8TCS8 783 aaKnown RBP9.46□□□□□ -0.9
RNF4-218ENST00000513284 STK35Q8TDR2 534 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 ZBTB9Q96C00 473 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 SORT1Q99523 831 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 RAD21L1Q9H4I0 556 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 C1RLQ9NZP8 487 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 PURGQ9UJV8 347 aaKnown RBP9.46□□□□□ -0.9
RNF4-218ENST00000513284 ZNF346Q9UL40 294 aaKnown RBP9.46□□□□□ -0.9
RNF4-218ENST00000513284 POLR3KQ9Y2Y1 108 aaPredicted RBP9.46□□□□□ -0.9
RNF4-218ENST00000513284 NOX1Q9Y5S8 564 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 INSIG2Q9Y5U4 225 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 AUP1Q9Y679 476 aa9.46□□□□□ -0.9
RNF4-218ENST00000513284 IGHV3OR16-10A0A075B7F0 116 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 A0A1B0GUS0 222 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 A0A1W2PPW3 197 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 CDHR4A6H8M9 788 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 G3V4G9 280 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 TIMM23O14925 209 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 HDAC3O15379 428 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 FRS3O43559 492 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 SLC43A1O75387 559 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 BCHEP06276 602 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 TFPTP0C1Z6 253 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 PATE4P0C8F1 98 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 ZNF250P15622 560 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 ZNF12P17014 697 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 ZNF43P17038 809 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 ERVS71-1P61550 626 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 RAB1AP62820 205 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 BST1Q10588 318 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 MMEL1Q495T6 779 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 PDCD4Q53EL6 469 aaKnown RBP9.45□□□□□ -0.9
RNF4-218ENST00000513284 TMEM255AQ5JRV8 349 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 GKAP1Q5VSY0 366 aaPredicted RBP9.45□□□□□ -0.9
RNF4-218ENST00000513284 C1orf140Q5VVS0 124 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 BRICD5Q6PL45 260 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 C5orf46Q6UWT4 87 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 NHLRC1Q6VVB1 395 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 MSANTD1Q6ZTZ1 278 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 C9orf139Q6ZV77 190 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 ZNF627Q7L945 461 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 RAB1CQ92928 201 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 SLC35B4Q969S0 331 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 ITCHQ96J02 903 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 OR2M2Q96R28 347 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 PTDSS2Q9BVG9 487 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 SPATA9Q9BWV2 254 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 PRDM13Q9H4Q3 707 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 BEX1Q9HBH7 125 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 THAP1Q9NVV9 213 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 RLIMQ9NVW2 624 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 RPS6KB2Q9UBS0 482 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 RCE1Q9Y256 329 aa9.45□□□□□ -0.9
RNF4-218ENST00000513284 ZNF443Q9Y2A4 671 aaPredicted RBP9.45□□□□□ -0.9
RNF4-218ENST00000513284 A0A0G2JPF8 293 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 CLPSL1A2RUU4 121 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 HNRNPCL2B2RXH8 293 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 HNRNPCL3B7ZW38 293 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 CLDN25C9JDP6 229 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 M0R3G1 203 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 SDHDO14521 159 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 HOXA3O43365 443 aaPredicted RBP9.44□□□□□ -0.9
RNF4-218ENST00000513284 OR2T1O43869 369 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 HNRNPCL1O60812 293 aaKnown RBP9.44□□□□□ -0.9
RNF4-218ENST00000513284 SLC22A3O75751 556 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 UBOX5O94941 541 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 NGFP01138 241 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 ALDOCP09972 364 aaKnown RBP9.44□□□□□ -0.9
RNF4-218ENST00000513284 GKN3PP0CG01 181 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 ZCCHC18P0CG32 403 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 HNRNPCL4P0DMR1 293 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 PNMTP11086 282 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 MAKP20794 623 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 CD80P33681 288 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 CDKN2CP42773 168 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 GIPRP48546 466 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 PTDSS1P48651 473 aaKnown RBP9.44□□□□□ -0.9
RNF4-218ENST00000513284 RAG2P55895 527 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 SEC61A1P61619 476 aaKnown RBP9.44□□□□□ -0.9
RNF4-218ENST00000513284 EGR4Q05215 589 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 PAX8Q06710 450 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 RAB39AQ14964 217 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 TAF9Q16594 264 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 TSTQ16762 297 aaKnown RBP9.44□□□□□ -0.9
RNF4-218ENST00000513284 NKPD1Q17RQ9 610 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 PCGF3Q3KNV8 242 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms