RNA–Protein interactions for RNA: ENST00000512303.1

TRIO-219, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-219ENST00000512303 SPARTQ8N0X7 666 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 BEST3Q8N1M1 668 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 STX19Q8N4C7 294 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 OR4N2Q8NGD1 307 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 OR4C3Q8NH37 302 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 ZNF563Q8TA94 476 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 TMEM163Q8TC26 289 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 RAB2BQ8WUD1 216 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 RNF138Q8WVD3 245 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 CNOT9Q92600 299 aaKnown RBP6.23□□□□□ -1.41
TRIO-219ENST00000512303 BPIFA2Q96DR5 249 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 SGTBQ96EQ0 304 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 SGCZQ96LD1 299 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 IMMP1LQ96LU5 166 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 ADOQ96SZ5 270 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 COPS4Q9BT78 406 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 CDCA4Q9BXL8 241 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 SMURF1Q9HCE7 757 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 KLHL1Q9NR64 748 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 FBXO34Q9NWN3 711 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 CHCHD3Q9NX63 227 aaKnown RBP6.23□□□□□ -1.41
TRIO-219ENST00000512303 RSL24D1Q9UHA3 163 aaKnown RBP6.23□□□□□ -1.41
TRIO-219ENST00000512303 KLHL21Q9UJP4 597 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 YARS2Q9Y2Z4 477 aaKnown RBP6.23□□□□□ -1.41
TRIO-219ENST00000512303 ZNF337Q9Y3M9 751 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 SPIN1Q9Y657 262 aaPredicted RBP6.23□□□□□ -1.41
TRIO-219ENST00000512303 CSPG4Q6UVK1 2322 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 MYO7BQ6PIF6 2116 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 ABCA4P78363 2273 aa6.23□□□□□ -1.41
TRIO-219ENST00000512303 SNRNP200O75643 2136 aaKnown RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 A0A087WZY1 265 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 TRBV11-1A0A0K0K1C0 115 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 A0A1B0GTH9 108 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 CLDN24A6NM45 220 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 INAFM1C9JVW0 142 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 ARPC3O15145 178 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 ZNF208O43345 1280 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 NME2P1O60361 137 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 WDR1O75083 606 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 PTP4A3O75365 173 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 WBP4O75554 376 aaKnown RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 SEC14L2O76054 403 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 NDUFB2O95178 105 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 TSPAN15O95858 294 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 FADS2O95864 444 aaKnown RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 HIST1H2ABP04908 130 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 CDK1P06493 297 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 GKN3PP0CG01 181 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 PEPDP12955 493 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 GABRA1P14867 456 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 PAICSP22234 425 aaKnown RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 ACVR2AP27037 513 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 EVI2BP34910 448 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 APOBEC1P41238 236 aaKnown RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 EIF1P41567 113 aaKnown RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 SLC15A1P46059 708 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 CLK1P49759 484 aaKnown RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 POLR2HP52434 150 aaKnown RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 LGALS3BPQ08380 585 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 C1DQ13901 141 aaKnown RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 NTRK2Q16620 822 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 PGGHGQ32M88 737 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 TIMM50Q3ZCQ8 353 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 SYT6Q5T7P8 510 aaPredicted RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 UBE2UQ5VVX9 321 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 SPINK14Q6IE38 97 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 DPY19L2P2Q6ZN68 376 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 LINC00299Q6ZSB3 139 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 HIST3H2AQ7L7L0 130 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 LNX2Q8N448 690 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 OR13F1Q8NGS4 319 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 B4GALNT2Q8NHY0 566 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 HAVCR2Q8TDQ0 301 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 TMEM255BQ8WV15 326 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 APH1BQ8WW43 257 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 HIST1H2ACQ93077 130 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 HGDQ93099 445 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 C3orf49Q96BT1 292 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 EFHD2Q96C19 240 aaPredicted RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 MRPL48Q96GC5 212 aaKnown RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 TMEM80Q96HE8 168 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 SIGLEC12Q96PQ1 595 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 SIGLEC11Q96RL6 698 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 GPX7Q96SL4 187 aaPredicted RBP6.22□□□□□ -1.41
TRIO-219ENST00000512303 DOK1Q99704 481 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 WFDC6Q9BQY6 131 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 TSSK6Q9BXA6 273 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 LIME1Q9H400 295 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 PTGES2Q9H7Z7 377 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 FKRPQ9H9S5 495 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 ISYNA1Q9NPH2 558 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 INPP5EQ9NRR6 644 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 TBC1D23Q9NUY8 699 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 ZNF226Q9NYT6 803 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 TVP23BQ9NYZ1 205 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 PTTG2Q9NZH5 202 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 CNIH4Q9P003 139 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 ZNF229Q9UJW7 825 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 ERGIC3Q9Y282 383 aa6.22□□□□□ -1.41
TRIO-219ENST00000512303 EXOSC1Q9Y3B2 195 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms