RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TMEM239Q8WW34 195 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 FAM168AQ92567 244 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 ZNF566Q969W8 418 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 SGTBQ96EQ0 304 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 SORCS2Q96PQ0 1159 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 SLC19A3Q9BZV2 496 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 RHCGQ9UBD6 479 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 HIVEP2P31629 2446 aa12.84□□□□□ -0.35
UBE2D3-228ENST00000508974 MCIDASD6RGH6 385 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 NME4O00746 187 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 GSTA4O15217 222 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 SLC22A2O15244 555 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 OR7A10O76100 309 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 ZNF682O95780 498 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 BCL10O95999 233 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 FUT4P22083 530 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 PAX7P23759 505 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 NUDT2P50583 147 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 SLC7A2P52569 658 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 EFNA4P52798 201 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 RPL18Q07020 188 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 ZP4Q12836 540 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 SNTB2Q13425 540 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 KRTAP21-3Q3LHN1 58 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 C3orf36Q3SXR2 165 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 VTCN1Q7Z7D3 282 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 MEX3DQ86XN8 651 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 TREML1Q86YW5 311 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 SLC15A3Q8IY34 581 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 SVOPLQ8N434 492 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 OR4F15Q8NGB8 312 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 OR6X1Q8NH79 312 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 NANOS1Q8WY41 292 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 TMEM54Q969K7 222 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 ELAC2Q9BQ52 826 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 MOV10Q9HCE1 1003 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 B3GNT2Q9NY97 397 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 GLTPQ9NZD2 209 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 ZNF224Q9NZL3 707 aa12.83□□□□□ -0.36
UBE2D3-228ENST00000508974 A0A1W2PRG6 482 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 SH3PXD2BA1X283 911 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 J3KTA2 159 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 hCG_2039718K7EN88 272 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 CCDC22O60826 627 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 RAB36O95755 333 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 PGA4P0DJD7 388 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 PGA3P0DJD8 388 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 AQP2P41181 271 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 RBM34P42696 430 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 GIPRP48546 466 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 SEC24CP53992 1094 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 CLRN1P58418 232 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 RAB1AP62820 205 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 SELENOWP63302 87 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 RUNX1T1Q06455 604 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 DAG1Q14118 895 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 SPATA21Q7Z572 469 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 ARPINQ7Z6K5 226 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 SKA3Q8IX90 412 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 FAM169BQ8N8A8 192 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 SYT14Q8NB59 555 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 OR10H5Q8NGA6 315 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 MOSPD2Q8NHP6 518 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 FGFBP3Q8TAT2 258 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 SLC25A44Q96H78 314 aaPredicted RBP12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 ZNF347Q96SE7 839 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 SH3GL3Q99963 347 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 YAE1D1Q9NRH1 226 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 MED31Q9Y3C7 131 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 SNX13Q9Y5W8 968 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 FKBP7Q9Y680 259 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 ABCA2Q9BZC7 2435 aa12.82□□□□□ -0.36
UBE2D3-228ENST00000508974 YLPM1P49750 1951 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 CHD3Q12873 2000 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 B9A039 149 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 CXCR6O00574 342 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 F12P00748 615 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 QDPRP09417 244 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 NCK1P16333 377 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 NPR2P20594 1047 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 DSCR9P59020 149 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 TOP3AQ13472 1001 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 RAB39AQ14964 217 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 LRFN4Q6PJG9 635 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 CCDC36Q8IYA8 594 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 ZCCHC24Q8N2G6 241 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 SLC22A24Q8N4F4 322 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 NUP37Q8NFH4 326 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 C10orf105Q8TEF2 133 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 LZICQ8WZA0 190 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 PRRC1Q96M27 445 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 POLR2J2Q9GZM3 115 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 POLR2J3Q9H1A7 115 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 INIPQ9NRY2 104 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 A4GNTQ9UNA3 340 aa12.81□□□□□ -0.36
UBE2D3-228ENST00000508974 ABCA1O95477 2261 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 A0A096LNT2 108 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 DHHO43323 396 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 UBL3O95164 117 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 SERPINA1P01009 418 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms