RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PPP1R3DO95685 299 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 RENP00797 406 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 CRISP1P54107 249 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 SH3BGRP55822 239 aaPredicted RBP17.75■□□□□ 0.43
USP53-203ENST00000507597 MYBPC1Q00872 1141 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 FAPQ12884 760 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 CLEC12AQ5QGZ9 265 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 THEM4Q5T1C6 240 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 ARMC4Q5T2S8 1044 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 TSPO2Q5TGU0 170 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 CARD17Q5XLA6 110 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 DNM1P34Q6PK57 102 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 THSD4Q6ZMP0 1018 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 SSX8Q7RTT4 187 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 C20orf196Q8IYI0 205 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 CBR4Q8N4T8 237 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 PACRGLQ8N7B6 248 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 RDH12Q96NR8 316 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 TSPAN32Q96QS1 320 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 SNX18Q96RF0 628 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 ULBP2Q9BZM5 246 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 SMURF2Q9HAU4 748 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 TAS2R16Q9NYV7 291 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 GLTPQ9NZD2 209 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 REV1Q9UBZ9 1251 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 IL20RAQ9UHF4 553 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 GPR52Q9Y2T5 361 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 MED12LQ86YW9 2145 aa17.75■□□□□ 0.43
USP53-203ENST00000507597 RPL36A-HNRNPH2H7BZ11 118 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 EI24O14681 340 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 MGRN1O60291 552 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 MPGP29372 298 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 CD79BP40259 229 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 GIPRP48546 466 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 ZNF84P51523 738 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 FXYD6P3P58550 94 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 CD47Q08722 323 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 KRR1Q13601 381 aaKnown RBP17.74■□□□□ 0.43
USP53-203ENST00000507597 C1QTNF12Q5T7M4 302 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 OR7E24Q6IFN5 339 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 FAM122BQ7Z309 247 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 LSRQ86X29 649 aaPredicted RBP17.74■□□□□ 0.43
USP53-203ENST00000507597 TMEM123Q8N131 208 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 LNX2Q8N448 690 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 NOXO1Q8NFA2 376 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 STEAP2Q8NFT2 490 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 PLEKHA8Q96JA3 519 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 Q96M85 177 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 SLC38A2Q96QD8 506 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 OR10A4Q9H209 315 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 SLC7A10Q9NS82 523 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 PRSS50Q9UI38 385 aa17.74■□□□□ 0.43
USP53-203ENST00000507597 TEX13CA0A0J9YWL9 993 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 CIB4A0PJX0 185 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 CLEC18AA5D8T8 446 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 M0R3G1 203 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 ALPLP05186 524 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 PGA4P0DJD7 388 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 PGA3P0DJD8 388 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 PAX7P23759 505 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 GRK5P34947 590 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 ZNF474Q6S9Z5 364 aaPredicted RBP17.73■□□□□ 0.43
USP53-203ENST00000507597 CLEC18BQ6UXF7 455 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 CLEC18CQ8NCF0 446 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 ZNF519Q8TB69 540 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 KISS1RQ969F8 398 aaPredicted RBP17.73■□□□□ 0.43
USP53-203ENST00000507597 TMEM54Q969K7 222 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 MRPL13Q9BYD1 178 aaKnown RBP17.73■□□□□ 0.43
USP53-203ENST00000507597 NDRG3Q9UGV2 375 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 ADAM18Q9Y3Q7 739 aa17.73■□□□□ 0.43
USP53-203ENST00000507597 RIIAD1A6NNX1 92 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 C16orf97H3BN30 126 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 BHLHE40O14503 412 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 SOCS2O14508 198 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 CASQ2O14958 399 aaPredicted RBP17.72■□□□□ 0.43
USP53-203ENST00000507597 PPP3CBP16298 524 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 ZNF26P17031 533 aaPredicted RBP17.72■□□□□ 0.43
USP53-203ENST00000507597 ZNF3P17036 446 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 PSMB1P20618 241 aaKnown RBP17.72■□□□□ 0.43
USP53-203ENST00000507597 PAICSP22234 425 aaKnown RBP17.72■□□□□ 0.43
USP53-203ENST00000507597 IL32P24001 234 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 CRABP1P29762 137 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 HOXC12P31275 282 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 NTF4P34130 210 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 SORDQ00796 357 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 ROR2Q01974 943 aaKnown RBP17.72■□□□□ 0.43
USP53-203ENST00000507597 NPRL3Q12980 569 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 GINS1Q14691 196 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 PGGHGQ32M88 737 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 GABRG1Q8N1C3 465 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 KCNK17Q96T54 332 aa17.72■□□□□ 0.43
USP53-203ENST00000507597 PRSS37A4D1T9 235 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 NKX2-6A6NCS4 301 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 UPK3AO75631 287 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 IGHV3-9P01782 118 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 QDPRP09417 244 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 HOXB1P14653 301 aaPredicted RBP17.71■□□□□ 0.43
USP53-203ENST00000507597 CDK5Q00535 292 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 SFRP5Q5T4F7 317 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms