RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SSX2Q16385 188 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 SASS6Q6UVJ0 657 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 ZNF836Q6ZNA1 936 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 LINC00173Q6ZV60 143 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 NANOGNBQ7Z5D8 188 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 HSD17B11Q8NBQ5 300 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 MDS2Q8NDY4 140 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 OR56B2PQ8NGI1 322 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 OR51G1Q8NGK1 321 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 OR1S2Q8NGQ3 325 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 OR1N2Q8NGR9 330 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 OR2G3Q8NGZ4 309 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 OR2G2Q8NGZ5 317 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 OR6X1Q8NH79 312 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 DTX3LQ8TDB6 740 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 TMEM54Q969K7 222 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 RASD2Q96D21 266 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 PKIBQ9C010 78 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 MRPL47Q9HD33 250 aaKnown RBP2.2□□□□□ -2.06
LSM6-205ENST00000507449 SLC2A8Q9NY64 477 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 PSMC3IPQ9P2W1 217 aaPredicted RBP2.2□□□□□ -2.06
LSM6-205ENST00000507449 DEC1Q9P2X7 70 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 GNPTGQ9UJJ9 305 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 PACSIN2Q9UNF0 486 aaPredicted RBP2.2□□□□□ -2.06
LSM6-205ENST00000507449 HEBP2Q9Y5Z4 205 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 WSB1Q9Y6I7 421 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 MAP3K15Q6ZN16 1313 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 PRRC2AP48634 2157 aaKnown RBP2.19□□□□□ -2.06
LSM6-205ENST00000507449 PDS5BQ9NTI5 1447 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 PLAC8L1A1L4L8 177 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 NKX2-6A6NCS4 301 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 OR2AG2A6NM03 316 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 CD5LO43866 347 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 SS18L1O75177 396 aaPredicted RBP2.19□□□□□ -2.06
LSM6-205ENST00000507449 SUPT3HO75486 399 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 FGGP02679 453 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 TOP1P11387 765 aaKnown RBP2.19□□□□□ -2.06
LSM6-205ENST00000507449 ZNF30P17039 623 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 CNR1P21554 472 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 NMUP48645 174 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 RORCP51449 518 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 CCR8P51685 355 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 RPS21P63220 83 aaKnown RBP2.19□□□□□ -2.06
LSM6-205ENST00000507449 PAX5Q02548 391 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 MADCAM1Q13477 382 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 TGFBIQ15582 683 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 RFX4Q33E94 735 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 TMEM255AQ5JRV8 349 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 PRAMEF20Q5VT98 475 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 Q6P435 159 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 LYPD2Q6UXB3 125 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 Q6ZVH6 145 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 B3GNT7Q8NFL0 401 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 GIMAP1Q8WWP7 306 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 AURKBQ96GD4 344 aaPredicted RBP2.19□□□□□ -2.06
LSM6-205ENST00000507449 KCTD14Q9BQ13 255 aaPredicted RBP2.19□□□□□ -2.06
LSM6-205ENST00000507449 CCDC77Q9BR77 488 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 HDHD3Q9BSH5 251 aaPredicted RBP2.19□□□□□ -2.06
LSM6-205ENST00000507449 NUP58Q9BVL2 599 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 CDC42EP4Q9H3Q1 356 aaKnown RBP2.19□□□□□ -2.06
LSM6-205ENST00000507449 ANKRA2Q9H9E1 313 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 CTPS2Q9NRF8 586 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 RBAKQ9NYW8 714 aaPredicted RBP2.19□□□□□ -2.06
LSM6-205ENST00000507449 NUFIP1Q9UHK0 495 aaKnown RBP2.19□□□□□ -2.06
LSM6-205ENST00000507449 LSM7Q9UK45 103 aaKnown RBP2.19□□□□□ -2.06
LSM6-205ENST00000507449 N6AMT1Q9Y5N5 214 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 CNTNAP1P78357 1384 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 CEMIPQ8WUJ3 1361 aa2.19□□□□□ -2.06
LSM6-205ENST00000507449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.19□□□□□ -2.06
LSM6-205ENST00000507449 HEATR9A2RTY3 570 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 CCDC169A6NNP5 214 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 SPECC1L-ADORA2AF8WAN1 911 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 PES1O00541 588 aaKnown RBP2.18□□□□□ -2.06
LSM6-205ENST00000507449 CA11O75493 328 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 EIF3GO75821 320 aaKnown RBP eCLIP2.18□□□□□ -2.06
LSM6-205ENST00000507449 CIB2O75838 187 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 ERLIN2O94905 339 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 PABPC4LP0CB38 370 aaKnown RBP2.18□□□□□ -2.06
LSM6-205ENST00000507449 CHMLP26374 656 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 IFNA8P32881 189 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 SLC26A3P40879 764 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 CXCL5P42830 114 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 NSG1P42857 185 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 CDKN1BP46527 198 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 CSNK1DP48730 415 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 MRPS22P82650 360 aaKnown RBP2.18□□□□□ -2.06
LSM6-205ENST00000507449 SRSF5Q13243 272 aaKnown RBP2.18□□□□□ -2.06
LSM6-205ENST00000507449 IDI1Q13907 227 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 CAPRIN1Q14444 709 aaKnown RBP2.18□□□□□ -2.06
LSM6-205ENST00000507449 ARHGAP19Q14CB8 494 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 XKR7Q5GH72 579 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 PIGGQ5H8A4 983 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 SPECC1LQ69YQ0 1117 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 CAMK2N1Q7Z7J9 78 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 STPG2Q8N412 459 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 FBXL13Q8NEE6 735 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 MCOLN3Q8TDD5 553 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 SDR42E1Q8WUS8 393 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 ELMO1Q92556 727 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 KIFAP3Q92845 792 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms