RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 GLTPQ9NZD2 209 aa11.85□□□□□ -0.51
PDCD6-204ENST00000506909 STX18Q9P2W9 335 aaKnown RBP11.85□□□□□ -0.51
PDCD6-204ENST00000506909 CRNNQ9UBG3 495 aaPredicted RBP11.85□□□□□ -0.51
PDCD6-204ENST00000506909 F8P00451 2351 aa11.85□□□□□ -0.51
PDCD6-204ENST00000506909 A0A096LPE4 126 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 A0A1W2PPZ6 126 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 EFCAB9A8MZ26 197 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 IGHG1P01857 330 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 FABP3P05413 133 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 DANCRP0C864 163 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 PGA4P0DJD7 388 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 PGA3P0DJD8 388 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 SAGP10523 405 aaPredicted RBP11.84□□□□□ -0.51
PDCD6-204ENST00000506909 DAP3P51398 398 aaKnown RBP11.84□□□□□ -0.51
PDCD6-204ENST00000506909 SMIM11AP58511 58 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 FHL1Q13642 323 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 MELKQ14680 651 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 HIST3H3Q16695 136 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 ALG10Q5BKT4 473 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 PODNL1Q6PEZ8 512 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 LRFN4Q6PJG9 635 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 OAFQ86UD1 273 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 LRRC75A-AS1Q8N1F1 130 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 DEPDC4Q8N2C3 294 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 PIAS4Q8N2W9 510 aaPredicted RBP11.84□□□□□ -0.51
PDCD6-204ENST00000506909 ASB10Q8WXI3 467 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 NEUROG1Q92886 237 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 SEPHS2Q99611 448 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 CCL19Q99731 98 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 MRPL13Q9BYD1 178 aaKnown RBP11.84□□□□□ -0.51
PDCD6-204ENST00000506909 TXNIPQ9H3M7 391 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 IL1RAPQ9NPH3 570 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 TMEM5Q9Y2B1 443 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 POFUT2Q9Y2G5 429 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 V9GYQ6 96 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 ARFGEF3Q5TH69 2177 aa11.84□□□□□ -0.51
PDCD6-204ENST00000506909 AKAP9Q99996 3911 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 MCIDASD6RGH6 385 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 UBOX5O94941 541 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 DIRAS1O95057 198 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 IGKV3-15P01624 115 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 IGLV1-44P01699 117 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 IGHMP01871 453 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 ACADSP16219 412 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 ARMC4Q5T2S8 1044 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 LCN8Q6JVE9 175 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 SLC22A25Q6T423 547 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 ZNF771Q7L3S4 317 aaPredicted RBP11.83□□□□□ -0.52
PDCD6-204ENST00000506909 PIWIL3Q7Z3Z3 882 aaKnown RBP11.83□□□□□ -0.52
PDCD6-204ENST00000506909 LRRC75AQ8NAA5 344 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 OR51A7Q8NH64 312 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 TMEM171Q8WVE6 324 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 POP5Q969H6 163 aaKnown RBP11.83□□□□□ -0.52
PDCD6-204ENST00000506909 POM121Q96HA1 1249 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 SLC38A2Q96QD8 506 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 TNFRSF13CQ96RJ3 184 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 ZNF347Q96SE7 839 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 FOXB1Q99853 325 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 FUZQ9BT04 418 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 GRIP2Q9C0E4 1043 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 CISD1Q9NZ45 108 aaKnown RBP11.83□□□□□ -0.52
PDCD6-204ENST00000506909 RTTNQ86VV8 2226 aa11.83□□□□□ -0.52
PDCD6-204ENST00000506909 MAP1AP78559 2803 aaPredicted RBP11.82□□□□□ -0.52
PDCD6-204ENST00000506909 CELSR1Q9NYQ6 3014 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 IGHV1-18A0A0C4DH31 117 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 TRBV4-1A0A0J9YWV2 114 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 CDC42EP2O14613 210 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 DHHO43323 396 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 SMPD2O60906 423 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 TRMUO75648 421 aaKnown RBP11.82□□□□□ -0.52
PDCD6-204ENST00000506909 GADD45GO95257 159 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 PAX1P15863 534 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 CBR1P16152 277 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 ATP6V1B2P21281 511 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 ARR3P36575 388 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 GPR4P46093 362 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 OMPP47874 163 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 ZNF133P52736 654 aaPredicted RBP11.82□□□□□ -0.52
PDCD6-204ENST00000506909 CDH11P55287 796 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 CLRN1P58418 232 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 CTXN1P60606 82 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 RPL27P61353 136 aaKnown RBP11.82□□□□□ -0.52
PDCD6-204ENST00000506909 MS4A2Q01362 244 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 RUNX1T1Q06455 604 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 PGGHGQ32M88 737 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 ZBED5Q49AG3 693 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 FGD3Q5JSP0 725 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 CYP2R1Q6VVX0 501 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 ZNF813Q6ZN06 617 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 DHFR2Q86XF0 187 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 MEX3DQ86XN8 651 aaKnown RBP11.82□□□□□ -0.52
PDCD6-204ENST00000506909 ZDHHC21Q8IVQ6 265 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 OR4K5Q8NGD3 323 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 SMAP2Q8WU79 429 aaPredicted RBP11.82□□□□□ -0.52
PDCD6-204ENST00000506909 ASB9Q96DX5 294 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 KRCC1Q9NPI7 259 aaPredicted RBP11.82□□□□□ -0.52
PDCD6-204ENST00000506909 B3GNT2Q9NY97 397 aa11.82□□□□□ -0.52
PDCD6-204ENST00000506909 CHD3Q12873 2000 aaKnown RBP11.81□□□□□ -0.52
PDCD6-204ENST00000506909 TRAV27A0A087WT01 109 aa11.81□□□□□ -0.52
PDCD6-204ENST00000506909 TCRBV5S2A0A599 114 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms