RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ZNF556Q9HAH1 456 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 SMURF2Q9HAU4 748 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 ASB6Q9NWX5 421 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 STX18Q9P2W9 335 aaKnown RBP11.32□□□□□ -0.6
TCOF1-210ENST00000506767 GRHPRQ9UBQ7 328 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 UPB1Q9UBR1 384 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 IER3IP1Q9Y5U9 82 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 FLNCQ14315 2725 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 A6NIZ1 184 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 SAC3D1A6NKF1 404 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 IDH3BO43837 385 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 SOX14O95416 240 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 PPP1R3DO95685 299 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 BAG2O95816 211 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 IGHG1P01857 330 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 ITGA5P08648 1049 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 ANPEPP15144 967 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 MPGP29372 298 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 CCKARP32238 428 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 UGT2B10P36537 528 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 CSNK1A1P48729 337 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 RPS6KA3P51812 740 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 ZNF133P52736 654 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-210ENST00000506767 RAP1BP61224 184 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 RAP1AP62834 184 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 SORDQ00796 357 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 ITGADQ13349 1161 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 TOP3AQ13472 1001 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-210ENST00000506767 RCN1Q15293 331 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 STK11Q15831 433 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 CARD17Q5XLA6 110 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 LRFN4Q6PJG9 635 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 ABHD12BQ7Z5M8 362 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-210ENST00000506767 CXorf67Q86X51 503 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-210ENST00000506767 GPR137CQ8N3F9 429 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 ZNF433Q8N7K0 673 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-210ENST00000506767 OR52L1Q8NGH7 329 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 NMD3Q96D46 503 aaKnown RBP11.31□□□□□ -0.6
TCOF1-210ENST00000506767 ZNF570Q96NI8 536 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 ERMAPQ96PL5 475 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-210ENST00000506767 CIB1Q99828 191 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 IFT27Q9BW83 186 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 HDHD5Q9BXW7 423 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 OR10A4Q9H209 315 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 GPR35Q9HC97 309 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 PAPOLBQ9NRJ5 636 aaKnown RBP11.31□□□□□ -0.6
TCOF1-210ENST00000506767 TAS2R16Q9NYV7 291 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 GLTPQ9NZD2 209 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 TMEFF2Q9UIK5 374 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-210ENST00000506767 POFUT2Q9Y2G5 429 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 GPR52Q9Y2T5 361 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 ICE1Q9Y2F5 2266 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 CACNA1CQ13936 2221 aa11.31□□□□□ -0.6
TCOF1-210ENST00000506767 USP9XQ93008 2570 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-210ENST00000506767 TEX13CA0A0J9YWL9 993 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 C16orf97H3BN30 126 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 M0R3G1 203 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 AHCYL1O43865 530 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 ROR2Q01974 943 aaKnown RBP11.3□□□□□ -0.6
TCOF1-210ENST00000506767 SLC36A3Q495N2 470 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 MESTQ5EB52 335 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 CLEC12AQ5QGZ9 265 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 ZNF362Q5T0B9 420 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-210ENST00000506767 LNX2Q8N448 690 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 NOXO1Q8NFA2 376 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 OR6N1Q8NGY5 312 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 OR4Q3Q8NH05 313 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 MAGEE2Q8TD90 523 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-210ENST00000506767 RASD2Q96D21 266 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 ZNF837Q96EG3 531 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-210ENST00000506767 MUS81Q96NY9 551 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 ALKBH3Q96Q83 286 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-210ENST00000506767 RBM4BQ9BQ04 359 aaKnown RBP11.3□□□□□ -0.6
TCOF1-210ENST00000506767 ALG12Q9BV10 488 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 RBM4Q9BWF3 364 aaKnown RBP11.3□□□□□ -0.6
TCOF1-210ENST00000506767 TSSK6Q9BXA6 273 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 DCLRE1BQ9H816 532 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 CRLF2Q9HC73 371 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 KRT84Q9NSB2 600 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 TBC1D23Q9NUY8 699 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 USE1Q9NZ43 259 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 KIF17Q9P2E2 1029 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 BAIAP2Q9UQB8 552 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 DOPEY1Q5JWR5 2465 aa11.3□□□□□ -0.6
TCOF1-210ENST00000506767 ALPK2Q86TB3 2170 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 A1L4Q6 167 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 PRSS37A4D1T9 235 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 PRSS44E7EML9 344 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 ZNF587BE7ETH6 402 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 H3BN98 237 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 ARHGEF9O43307 516 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 MITFO75030 526 aaPredicted RBP11.29□□□□□ -0.6
TCOF1-210ENST00000506767 LYZL6O75951 148 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 KRT33AO76009 404 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 ALPLP05186 524 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 QDPRP09417 244 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 HIST1H1CP16403 213 aaKnown RBP11.29□□□□□ -0.6
TCOF1-210ENST00000506767 PEX19P40855 299 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 CDKN2AP42771 156 aaKnown RBP11.29□□□□□ -0.6
TCOF1-210ENST00000506767 GIPRP48546 466 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms