RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	ADAM8	P78325	824 aa		13	□□□□□ -0.33
CNBP-208	ENST00000504813	SLC35A1	P78382	337 aa		13	□□□□□ -0.33
CNBP-208	ENST00000504813	TOP3A	Q13472	1001 aa	Predicted RBP	13	□□□□□ -0.33
CNBP-208	ENST00000504813	BLMH	Q13867	455 aa		13	□□□□□ -0.33
CNBP-208	ENST00000504813	ACKR1	Q16570	336 aa		13	□□□□□ -0.33
CNBP-208	ENST00000504813	WFDC8	Q8IUA0	241 aa		13	□□□□□ -0.33
CNBP-208	ENST00000504813	KISS1R	Q969F8	398 aa	Predicted RBP	13	□□□□□ -0.33
CNBP-208	ENST00000504813	PLPPR2	Q96GM1	343 aa		13	□□□□□ -0.33
CNBP-208	ENST00000504813	TEX12	Q9BXU0	123 aa		13	□□□□□ -0.33
CNBP-208	ENST00000504813	POTEKP	Q9BYX7	375 aa		13	□□□□□ -0.33
CNBP-208	ENST00000504813	BATF3	Q9NR55	127 aa		13	□□□□□ -0.33
CNBP-208	ENST00000504813	BEX4	Q9NWD9	120 aa	Predicted RBP	13	□□□□□ -0.33
CNBP-208	ENST00000504813	EMC3	Q9P0I2	261 aa		13	□□□□□ -0.33
CNBP-208	ENST00000504813	REV1	Q9UBZ9	1251 aa		13	□□□□□ -0.33
CNBP-208	ENST00000504813	BLOC1S6	Q9UL45	172 aa		13	□□□□□ -0.33
CNBP-208	ENST00000504813	NOSIP	Q9Y314	301 aa	Known RBP	13	□□□□□ -0.33
CNBP-208	ENST00000504813	ELOA3D	A6NLF2	546 aa	Predicted RBP	12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	EIF1B	O60739	113 aa	Known RBP	12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	LYPD3	O95274	346 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	IFI30	P13284	250 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	COX5A	P20674	150 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	IGHV1-2	P23083	117 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	IL32	P24001	234 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	EPHA2	P29317	976 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	OMP	P47874	163 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	GSS	P48637	474 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	ISL1	P61371	349 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	CD47	Q08722	323 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	PTGES3	Q15185	160 aa	Known RBP	12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	TAB1	Q15750	504 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	ELOA3B	Q3SY89	546 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	KCTD21	Q4G0X4	260 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	RBM48	Q5RL73	367 aa	Known RBP	12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	SEZ6L2	Q6UXD5	910 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	BHLHA15	Q7RTS1	189 aa	Predicted RBP	12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	ZNF100	Q8IYN0	542 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	ELOA3	Q8NG57	546 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	FAM81A	Q8TBF8	368 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	TEX47	Q8TBZ9	253 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	HSD17B8	Q92506	261 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	HDAC2	Q92769	488 aa	Known RBP	12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	TMEM204	Q9BSN7	226 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	UBTD1	Q9HAC8	227 aa		12.99	□□□□□ -0.33
CNBP-208	ENST00000504813	ZAR1L	A6NP61	321 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	KPNA4	O00629	521 aa	Predicted RBP	12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	GPR171	O14626	319 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	PIP5K1C	O60331	668 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	MPZL2	O60487	215 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	LYZL6	O75951	148 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	SOX14	O95416	240 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	PLAU	P00749	431 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	HOXC12	P31275	282 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	IDUA	P35475	653 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	GPR4	P46093	362 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	NR1H2	P55055	460 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	PRKCD	Q05655	676 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	C6orf141	Q5SZD1	244 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	PAQR6	Q6TCH4	344 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	CASP12	Q6UXS9	341 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	WDR88	Q6ZMY6	472 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	RASSF6	Q6ZTQ3	369 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	KRTAP1-3	Q8IUG1	177 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	TSPAN14	Q8NG11	270 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	C3orf49	Q96BT1	292 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	USB1	Q9BQ65	265 aa	Known RBP	12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	NAA11	Q9BSU3	229 aa	Predicted RBP	12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	HTR3E	A5X5Y0	456 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	UNC119B	A6NIH7	251 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	LIPT2	A6NK58	231 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813		A8MVM7	634 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813		E9PQ18	207 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	NPIPB7	O75200	414 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	CD99	P14209	185 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	LSM11	P83369	360 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	CDK5R2	Q13319	367 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	SLC17A1	Q14916	467 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	MAD2L1BP	Q15013	274 aa	Predicted RBP	12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	FBXW9	Q5XUX1	488 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	ZNF704	Q6ZNC4	412 aa	Predicted RBP	12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	C20orf204	Q6ZNR8	217 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	ATG4D	Q86TL0	474 aa	Predicted RBP	12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	ZNF433	Q8N7K0	673 aa	Predicted RBP	12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	PIGT	Q969N2	578 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	APH1A	Q96BI3	265 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	BPIFA2	Q96DR5	249 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	MRPS26	Q9BYN8	205 aa	Known RBP	12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	PRRG3	Q9BZD7	231 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	C12orf10	Q9HB07	376 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	SCN3B	Q9NY72	215 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813	FLVCR1	Q9Y5Y0	555 aa		12.98	□□□□□ -0.33
CNBP-208	ENST00000504813		A0A087WUJ7	227 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	EFCAB9	A8MZ26	197 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	MRPL33	O75394	65 aa	Known RBP	12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	AKR7A3	O95154	331 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	IGHV3-9	P01782	118 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	SAG	P10523	405 aa	Predicted RBP	12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	PTN	P21246	168 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	EEF1B2	P24534	225 aa	Known RBP	12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	CSNK2B	P67870	215 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	OR7A5	Q15622	319 aa		12.97	□□□□□ -0.33

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