RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ADORA3P0DMS8 318 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 ZNF35P13682 527 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 HOXB1P14653 301 aaPredicted RBP11.32□□□□□ -0.6
DDX41-204ENST00000504807 USF1P22415 310 aaPredicted RBP11.32□□□□□ -0.6
DDX41-204ENST00000504807 NR4A2P43354 598 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 CAPZA2P47755 286 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 SNRPD2P62316 118 aaKnown RBP11.32□□□□□ -0.6
DDX41-204ENST00000504807 KLF10Q13118 480 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 SNTB2Q13425 540 aaKnown RBP11.32□□□□□ -0.6
DDX41-204ENST00000504807 GGTLC2Q14390 218 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 TRMT5Q32P41 509 aaKnown RBP11.32□□□□□ -0.6
DDX41-204ENST00000504807 CYB5R2Q6BCY4 276 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 ZNF813Q6ZN06 617 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 CCDC80Q76M96 950 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 PXKQ7Z7A4 578 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 SKA3Q8IX90 412 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 PAQR4Q8N4S7 273 aaPredicted RBP11.32□□□□□ -0.6
DDX41-204ENST00000504807 OR5J2Q8NH18 312 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 TMEM255BQ8WV15 326 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 LRR1Q96L50 414 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 ZNF583Q96ND8 569 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 EPYCQ99645 322 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 MRPL37Q9BZE1 423 aaKnown RBP11.32□□□□□ -0.6
DDX41-204ENST00000504807 ULBP2Q9BZM5 246 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 BPESC1Q9GZL8 116 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 ZNF442Q9H7R0 627 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 SAR1AQ9NR31 198 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 NOX1Q9Y5S8 564 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 PMF1-BGLAPU3KQ54 211 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 PRKDCP78527 4128 aaKnown RBP11.32□□□□□ -0.6
DDX41-204ENST00000504807 DYSFO75923 2080 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 SH3PXD2BA1X283 911 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 LRP5LA4QPB2 252 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 TRAPPC13A5PLN9 417 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 B9A039 149 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 TCF21O43680 179 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 PIP5K1CO60331 668 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 PDE5AO76074 875 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 MT-ATP6P00846 226 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 CD79AP11912 226 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 ITGA2P17301 1181 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 ARR3P36575 388 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 OR1E2P47887 323 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 GIPRP48546 466 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 PPOXP50336 477 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 FAM120AOSQ5T036 256 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 SLC35D2Q76EJ3 337 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 SPATA21Q7Z572 469 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 CARM1Q86X55 608 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 C3orf56Q8N813 242 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 BHLHE22Q8NFJ8 381 aaPredicted RBP11.31□□□□□ -0.6
DDX41-204ENST00000504807 TSPEARQ8WU66 669 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 PROX1Q92786 737 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 LRRC58Q96CX6 371 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 MSI2Q96DH6 328 aaKnown RBP11.31□□□□□ -0.6
DDX41-204ENST00000504807 FOXB1Q99853 325 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 SH3GL3Q99963 347 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 TPK1Q9H3S4 243 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 SLC13A4Q9UKG4 626 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 FZR1Q9UM11 496 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 ZNF281Q9Y2X9 895 aa11.31□□□□□ -0.6
DDX41-204ENST00000504807 IGKV1D-43A0A0B4J1Z2 117 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 F13BP05160 661 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 PGA4P0DJD7 388 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 PGA3P0DJD8 388 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 NPR2P20594 1047 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 NR4A1P22736 598 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 PTDSS1P48651 473 aaKnown RBP11.3□□□□□ -0.6
DDX41-204ENST00000504807 CSNK1A1P48729 337 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 PDLIM4P50479 330 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 SEC24CP53992 1094 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 MYBPC1Q00872 1141 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 ZP4Q12836 540 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 PIN1Q13526 163 aaPredicted RBP11.3□□□□□ -0.6
DDX41-204ENST00000504807 RAB39AQ14964 217 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 MAD2L1BPQ15013 274 aaPredicted RBP11.3□□□□□ -0.6
DDX41-204ENST00000504807 TRIP10Q15642 601 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 CARTPTQ16568 116 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 FXNQ16595 210 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 GSG1Q2KHT4 349 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 TMEM255AQ5JRV8 349 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 METTL21CQ5VZV1 264 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 TTC33Q6PID6 262 aaPredicted RBP11.3□□□□□ -0.6
DDX41-204ENST00000504807 PATL1Q86TB9 770 aaKnown RBP11.3□□□□□ -0.6
DDX41-204ENST00000504807 SNX32Q86XE0 403 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 OR4F15Q8NGB8 312 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 OR6N1Q8NGY5 312 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 OR6X1Q8NH79 312 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 MOSPD2Q8NHP6 518 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 KCNS3Q9BQ31 491 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 SELENONQ9NZV5 590 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 ARMCX1Q9P291 453 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 SH3GLB1Q9Y371 365 aa11.3□□□□□ -0.6
DDX41-204ENST00000504807 LOC100653049A0A140TA62 436 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 MRASO14807 208 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 AKAP8O43823 692 aaKnown RBP11.29□□□□□ -0.6
DDX41-204ENST00000504807 KRT34O76011 436 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 STAMBPO95630 424 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 ADRA2AP08913 450 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms