RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 HOXC5Q00444 222 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 NPTX1Q15818 432 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 GTDC1Q4AE62 458 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 INTS11Q5TA45 600 aaKnown RBP6.69□□□□□ -1.34
MATR3-210ENST00000504643 TMEM154Q6P9G4 183 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 SLC2A7Q6PXP3 512 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 CDK20Q8IZL9 346 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 C11orf65Q8NCR3 313 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 ZNF519Q8TB69 540 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 TSPEARQ8WU66 669 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 STON2Q8WXE9 905 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 TMEM54Q969K7 222 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 ZNF566Q969W8 418 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 RAB39BQ96DA2 213 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 SLC25A44Q96H78 314 aaPredicted RBP6.69□□□□□ -1.34
MATR3-210ENST00000504643 OR52B2Q96RD2 323 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 MRPL37Q9BZE1 423 aaKnown RBP6.69□□□□□ -1.34
MATR3-210ENST00000504643 SLCO1B3Q9NPD5 702 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 MRGBPQ9NV56 204 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 GLTPQ9NZD2 209 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 ARFGEF3Q5TH69 2177 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 A0A1W2PPW3 197 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 TRIM77I1YAP6 450 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 J3QLI3 93 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 MSMBP08118 114 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 NUDT7P0C024 238 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 HOXB9P17482 250 aaPredicted RBP6.69□□□□□ -1.34
MATR3-210ENST00000504643 HTR2AP28223 471 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 LIPAP38571 399 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 GIPRP48546 466 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 ZNF84P51523 738 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 MAGOHP61326 146 aaKnown RBP6.69□□□□□ -1.34
MATR3-210ENST00000504643 SLC3A1Q07837 685 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 NKPD1Q17RQ9 610 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 TBC1D28Q2M2D7 210 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 CARD17Q5XLA6 110 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 ACSM5Q6NUN0 579 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 NHLRC1Q6VVB1 395 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 LINC00114Q6XXX2 140 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 IL17RELQ6ZVW7 336 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 SLC35D2Q76EJ3 337 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 PATL1Q86TB9 770 aaKnown RBP6.69□□□□□ -1.34
MATR3-210ENST00000504643 TIMD4Q96H15 378 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 ZNF75AQ96N20 296 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 MCHR1Q99705 422 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 RBM4Q9BWF3 364 aaKnown RBP6.69□□□□□ -1.34
MATR3-210ENST00000504643 POLR2J2Q9GZM3 115 aaKnown RBP6.69□□□□□ -1.34
MATR3-210ENST00000504643 RACGAP1Q9H0H5 632 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 POLR2J3Q9H1A7 115 aaKnown RBP6.69□□□□□ -1.34
MATR3-210ENST00000504643 OCEL1Q9H607 264 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 RNF121Q9H920 327 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 CDH20Q9HBT6 801 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 NANSQ9NR45 359 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 ZNF229Q9UJW7 825 aa6.69□□□□□ -1.34
MATR3-210ENST00000504643 MFN2O95140 757 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 SNAP29O95721 258 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 BCL10O95999 233 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 IGF2P01344 180 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 CDH12P55289 794 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 KLF3P57682 345 aaPredicted RBP6.68□□□□□ -1.34
MATR3-210ENST00000504643 PIGFQ07326 219 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 GLIPR1L2Q4G1C9 344 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 ELFN2Q5R3F8 820 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 SLC22A24Q8N4F4 322 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 OR9I1Q8NGQ6 314 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 SYNPRQ8TBG9 265 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 FNDC8Q8TC99 324 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 LRRC8CQ8TDW0 803 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 ZNF837Q96EG3 531 aaPredicted RBP6.68□□□□□ -1.34
MATR3-210ENST00000504643 EMC6Q9BV81 110 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 SEC61A2Q9H9S3 476 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 HINT3Q9NQE9 182 aaKnown RBP6.68□□□□□ -1.34
MATR3-210ENST00000504643 CYSLTR2Q9NS75 346 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 HIF1ANQ9NWT6 349 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.68□□□□□ -1.34
MATR3-210ENST00000504643 CGGBP1Q9UFW8 167 aaPredicted RBP6.68□□□□□ -1.34
MATR3-210ENST00000504643 DUSP13Q9UII6 198 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 LEF1Q9UJU2 399 aaPredicted RBP6.68□□□□□ -1.34
MATR3-210ENST00000504643 DHHO43323 396 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 PPIHO43447 177 aaKnown RBP6.68□□□□□ -1.34
MATR3-210ENST00000504643 RNF13O43567 381 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 HPRP00739 348 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 IGHG1P01857 330 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 B4GALT1P15291 398 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 ZNF250P15622 560 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 ITGA2P17301 1181 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 CBLP22681 906 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 BIDP55957 195 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 ZCCHC24Q8N2G6 241 aaKnown RBP6.68□□□□□ -1.34
MATR3-210ENST00000504643 SLC30A7Q8NEW0 376 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 CLDND2Q8NHS1 167 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 SGMS2Q8NHU3 365 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 SLC26A7Q8TE54 656 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 RAB1CQ92928 201 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 TLCD1Q96CP7 247 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 TXNDC15Q96J42 360 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 DIRC2Q96SL1 478 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 ARHGDIGQ99819 225 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 SH3GL1Q99961 368 aa6.68□□□□□ -1.34
MATR3-210ENST00000504643 TPK1Q9H3S4 243 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms