RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ENTPD5O75356 428 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 TRMUO75648 421 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 KRT33AO76009 404 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 IGHG1P01857 330 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 ITGA5P08648 1049 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 PGA4P0DJD7 388 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 PGA3P0DJD8 388 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 APEHP13798 732 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 ANXA8P13928 327 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 ACADSP16219 412 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 PPP3CBP16298 524 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 SLC6A6P31641 620 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 CCKARP32238 428 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 CSNK1A1P48729 337 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 FOXG1P55316 489 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 ERVK-25P63136 954 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 LGALS3BPQ08380 585 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 MELKQ14680 651 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 CARD17Q5XLA6 110 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 GPR139Q6DWJ6 353 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 HMBOX1Q6NT76 420 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 RPL13AP3Q6NVV1 102 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 DPY19L2P2Q6ZN68 376 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 ZNF620Q6ZNG0 422 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 LINGO2Q7L985 606 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 FAM122BQ7Z309 247 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 AMIGO2Q86SJ2 522 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 IGFN1Q86VF2 1251 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 HIPK1Q86Z02 1210 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 HS3ST5Q8IZT8 346 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 CLDN22Q8N7P3 220 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 ARIH2OSQ8N7S6 290 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 ZNF519Q8TB69 540 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 FANK1Q8TC84 345 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 KISS1RQ969F8 398 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 ZNF566Q969W8 418 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 GTPBP3Q969Y2 492 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 CENPNQ96H22 339 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 BOD1Q96IK1 185 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 MRPL13Q9BYD1 178 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 S100A14Q9HCY8 104 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 B3GAT2Q9NPZ5 323 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 NRIP3Q9NQ35 241 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 GLTPQ9NZD2 209 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 NDRG3Q9UGV2 375 aa10.48□□□□□ -0.73
PDLIM5-208ENST00000504489 ERICH4A6NGS2 130 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 TUBAL3A6NHL2 446 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 A6NIZ1 184 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 ANKRD65E5RJM6 399 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 G3V2T6 193 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 IMPA2O14732 288 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 AHCYL1O43865 530 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 LYZL6O75951 148 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 PRKACGP22612 351 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 IL32P24001 234 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 COL8A1P27658 744 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 KIR2DL3P43628 341 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 SH3BGRP55822 239 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 RAP1BP61224 184 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 RAP1AP62834 184 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 ROR2Q01974 943 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 TGFBR3Q03167 851 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 RUNX1T1Q06455 604 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 STK11Q15831 433 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 GABRA6Q16445 453 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 HIST3H3Q16695 136 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 PHYHD1Q5SRE7 291 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 C1QTNF12Q5T7M4 302 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 OR7E24Q6IFN5 339 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 BHLHA15Q7RTS1 189 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 P2RY8Q86VZ1 359 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 ZDHHC13Q8IUH4 622 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 SVOPLQ8N434 492 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 C1orf162Q8NEQ5 155 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 OR6N1Q8NGY5 312 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 FAM222BQ8WU58 562 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 DNAJC9Q8WXX5 260 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 SAMD8Q96LT4 415 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 Q96M85 177 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 MUS81Q96NY9 551 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 ALKBH3Q96Q83 286 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 TSPAN32Q96QS1 320 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 NIPSNAP1Q9BPW8 284 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 ALG12Q9BV10 488 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 POLDIP3Q9BY77 421 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 ACTR6Q9GZN1 396 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 ZNF556Q9HAH1 456 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 GPR35Q9HC97 309 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 GRHPRQ9UBQ7 328 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 ADAM18Q9Y3Q7 739 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 MAGED1Q9Y5V3 778 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 CDH10Q9Y6N8 788 aa10.47□□□□□ -0.73
PDLIM5-208ENST00000504489 PLCE1Q9P212 2302 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 CIB4A0PJX0 185 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 SH3D21A4FU49 640 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 M0R3G1 203 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 ARPC3O15145 178 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 IDH3BO43837 385 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 TXNDC12O95881 172 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 TP53P04637 393 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms