RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 SKP1P63208 163 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 RPL18Q07020 188 aaKnown RBP6.37□□□□□ -1.39
SNX25-202ENST00000504273 TRAM1Q15629 374 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 SLC35D3Q5M8T2 416 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 LCN1P1Q5VSP4 162 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 FAM122CQ6P4D5 195 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 LEG1Q6P5S2 330 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 KANSL1Q7Z3B3 1105 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 TPRA1Q86W33 373 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 ZNF440Q8IYI8 595 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 DNAJA3Q96EY1 480 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 FYTTD1Q96QD9 318 aaKnown RBP6.37□□□□□ -1.39
SNX25-202ENST00000504273 OR14A2Q96R54 314 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 PELOQ9BRX2 385 aaKnown RBP6.37□□□□□ -1.39
SNX25-202ENST00000504273 VN1R1Q9GZP7 353 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 KCNN2Q9H2S1 579 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 RBFOX1Q9NWB1 397 aaKnown RBP6.37□□□□□ -1.39
SNX25-202ENST00000504273 U3KQA8 63 aa6.37□□□□□ -1.39
SNX25-202ENST00000504273 PTPN13Q12923 2485 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 A0A1B0GTH9 108 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 ELOA3DA6NLF2 546 aaPredicted RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 H7C1C5 153 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 TRIM77I1YAP6 450 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 RRP8O43159 456 aaKnown RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 LYRM1O43325 122 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 NUDT21O43809 227 aaKnown RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 SCO2O43819 266 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 GMFGO60234 142 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 FADS1O60427 444 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 CPNE3O75131 537 aaKnown RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 SNRPBP14678 240 aaKnown RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 MYL9P24844 172 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 RORAP35398 523 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 RPL4P36578 427 aaKnown RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 MAP2K3P46734 347 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 SLC25A1P53007 311 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 CLDN20P56880 219 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 TAS2R43P59537 309 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 LCN6P62502 163 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 DAB2P98082 770 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 IL10RAQ13651 578 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 GPR176Q14439 515 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 ELOA3BQ3SY89 546 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 TBRG1Q3YBR2 411 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 PLA1AQ53H76 456 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 C1orf189Q5VU69 101 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 MZT2AQ6P582 158 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 PAMR1Q6UXH9 720 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 C16orf47Q6ZP98 133 aaPredicted RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 LRRC28Q86X40 367 aaPredicted RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 SLITRK4Q8IW52 837 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 OR6V1Q8N148 313 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 ELOA3Q8NG57 546 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 NUDT22Q9BRQ3 303 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 MARVELD1Q9BSK0 173 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 ALG12Q9BV10 488 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 C12orf10Q9HB07 376 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 MRM2Q9UI43 246 aaKnown RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 A0A1B0GVT2 93 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 TIAF1O95411 115 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 CD14P08571 375 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 PNMTP11086 282 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 BIKQ13323 160 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 PON3Q15166 354 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 ELAVL1Q15717 326 aaKnown RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 FAM209BQ5JX69 171 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 SHEQ5VZ18 495 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 OTPQ5XKR4 325 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 RPL22L1Q6P5R6 122 aaKnown RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 ESPNLQ6ZVH7 1005 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 CDH24Q86UP0 819 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 CDC20BQ86Y33 519 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 SAMD12Q8N8I0 201 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 TRMT10AQ8TBZ6 339 aaKnown RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 LRRC20Q8TCA0 184 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 OIT3Q8WWZ8 545 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 KCTD12Q96CX2 325 aaKnown RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 CCNL2Q96S94 520 aaPredicted RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 AMELYQ99218 206 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 WWTR1Q9GZV5 400 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.36□□□□□ -1.39
SNX25-202ENST00000504273 DUSP15Q9H1R2 295 aaPredicted RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 RANGRFQ9HD47 186 aaPredicted RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 NLKQ9UBE8 527 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 CTSFQ9UBX1 484 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 GNG8Q9UK08 70 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 PCDHGA9Q9Y5G4 932 aaKnown RBP6.36□□□□□ -1.39
SNX25-202ENST00000504273 ALG5Q9Y673 324 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 SEC16AO15027 2179 aa6.36□□□□□ -1.39
SNX25-202ENST00000504273 MYO9AB2RTY4 2548 aa6.35□□□□□ -1.39
SNX25-202ENST00000504273 FZD7O75084 574 aa6.35□□□□□ -1.39
SNX25-202ENST00000504273 TSC22D2O75157 780 aa6.35□□□□□ -1.39
SNX25-202ENST00000504273 NPIPB7O75200 414 aa6.35□□□□□ -1.39
SNX25-202ENST00000504273 AKR7A3O95154 331 aa6.35□□□□□ -1.39
SNX25-202ENST00000504273 ZFPL1O95159 310 aa6.35□□□□□ -1.39
SNX25-202ENST00000504273 TRAPPC2P0DI81 140 aa6.35□□□□□ -1.39
SNX25-202ENST00000504273 TRAPPC2BP0DI82 140 aa6.35□□□□□ -1.39
SNX25-202ENST00000504273 APEHP13798 732 aaKnown RBP6.35□□□□□ -1.39
SNX25-202ENST00000504273 RAB3BP20337 219 aa6.35□□□□□ -1.39
SNX25-202ENST00000504273 AHCYP23526 432 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms