RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 ASB6Q9NWX5 421 aa7.27□□□□□ -1.25
TOPBP1-202ENST00000503338 B3GAT1Q9P2W7 334 aa7.27□□□□□ -1.25
TOPBP1-202ENST00000503338 SEC14L4Q9UDX3 406 aa7.27□□□□□ -1.25
TOPBP1-202ENST00000503338 RCE1Q9Y256 329 aa7.27□□□□□ -1.25
TOPBP1-202ENST00000503338 CAB39Q9Y376 341 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-202ENST00000503338 TMEM14AQ9Y6G1 99 aa7.27□□□□□ -1.25
TOPBP1-202ENST00000503338 EML6Q6ZMW3 1958 aa7.27□□□□□ -1.25
TOPBP1-202ENST00000503338 A0A1B0GVC2 190 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 DAPL1A0PJW8 107 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 TMEM8BA6NDV4 472 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 CCDC160A6NGH7 325 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 OR6C65A6NJZ3 312 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 HSPB2A8KAH6 182 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 C12orf71A8MTZ7 269 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 J3QRE1 110 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 TRAF3IP2O43734 574 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 CXCL13O43927 109 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 CYTIPO60759 359 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 KHDRBS3O75525 346 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 OPN1LWP04000 364 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 HLA-DOBP13765 273 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 CPN1P15169 458 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 PLA2G5P39877 138 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 RFC3P40938 356 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 GUCA1AP43080 201 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 MAP2K4P45985 399 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 EIF1AXP47813 144 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 CD97P48960 835 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 SH3BGRP55822 239 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 BIDP55957 195 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 CLDN15P56746 228 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 CLDN20P56880 219 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 CLRN1P58418 232 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 TAS2R43P59537 309 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 ACSM1Q08AH1 577 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 C19orf57Q0VDD7 668 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 MLLT11Q13015 90 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 MRPL28Q13084 256 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 MELKQ14680 651 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 RNPS1Q15287 305 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 SF3B4Q15427 424 aaKnown RBP eCLIP7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 MED22Q15528 200 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 HSPB2Q16082 182 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 LINC01590Q5TEZ4 76 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 VASNQ6EMK4 673 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 ABLIM2Q6H8Q1 611 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 NHLRC1Q6VVB1 395 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 TRILQ7L0X0 811 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 FCRLAQ7L513 359 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 SHFQ7M4L6 423 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 SLC16A9Q7RTY1 509 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 KCTD20Q7Z5Y7 419 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 ALDH16A1Q8IZ83 802 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 OR6V1Q8N148 313 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 EXD3Q8N9H8 876 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 NOXO1Q8NFA2 376 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 OR9K2Q8NGE7 335 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 RAB2BQ8WUD1 216 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 SARAFQ96BY9 339 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 DCBLD2Q96PD2 775 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 MGLLQ99685 303 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 SLC6A15Q9H2J7 730 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 MARCH7Q9H992 704 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 RNF122Q9H9V4 155 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 ADGRL4Q9HBW9 690 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 GP6Q9HCN6 339 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 SRA1Q9HD15 236 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 ERVK13-1Q9NX77 482 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 EMC3Q9P0I2 261 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 KLHL9Q9P2J3 617 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 KLHL13Q9P2N7 655 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 RSL24D1Q9UHA3 163 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 TUBD1Q9UJT1 453 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 B9D1Q9UPM9 204 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 B3GNT3Q9Y2A9 372 aa7.26□□□□□ -1.25
TOPBP1-202ENST00000503338 PIEZO1Q92508 2521 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 A0A087WV48 116 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 SLC35F4A4IF30 521 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 OR14I1A6ND48 311 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF670-ZNF695F2Z2N8 137 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 CCRL2O00421 344 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 AQP7O14520 342 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 SMAD9O15198 467 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 SLC16A7O60669 478 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 TMCC2O75069 709 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 INMTO95050 263 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 PTHP01270 115 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 MT-ND5P03915 603 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 HRGP04196 525 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 SCG5P05408 212 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 GYPBP06028 91 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 LCKP06239 509 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 CLUP10909 449 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 FCGR2AP12318 317 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 STARP49675 285 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 ETV1P50549 477 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 SUCLG1P53597 346 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 GP2P55259 537 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 CLDN18P56856 261 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 RASGEF1BQ0VAM2 473 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms