RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 OR1K1Q8NGR3 316 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 OR6N1Q8NGY5 312 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 ZC3HAV1LQ96H79 300 aaKnown RBP22.04■■□□□ 1.12
LSM6-202ENST00000502781 TSPAN32Q96QS1 320 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 NELFAQ9H3P2 528 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 B3GAT2Q9NPZ5 323 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 NRIP3Q9NQ35 241 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 ABCA12Q86UK0 2595 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 DEFB108AA8MXU0 73 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 GASTP01350 101 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 ACADSP16219 412 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 IST1P53990 364 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 ACTR3P61158 418 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 CEACAM16Q2WEN9 425 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 LRFN4Q6PJG9 635 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 SMARCD3Q6STE5 483 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 FAM122BQ7Z309 247 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 WDR31Q8NA23 367 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 ZNF519Q8TB69 540 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 BCL2L2Q92843 193 aaPredicted RBP22.03■■□□□ 1.12
LSM6-202ENST00000502781 NMD3Q96D46 503 aaKnown RBP22.03■■□□□ 1.12
LSM6-202ENST00000502781 KCNK17Q96T54 332 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 KATNB1Q9BVA0 655 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 DGCR6LQ9BY27 220 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 RASSF1Q9NS23 344 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 NOTCH2Q04721 2471 aa22.03■■□□□ 1.12
LSM6-202ENST00000502781 ARRDC5A6NEK1 342 aa22.02■■□□□ 1.12
LSM6-202ENST00000502781 TRMUO75648 421 aaKnown RBP22.02■■□□□ 1.12
LSM6-202ENST00000502781 ZNF133P52736 654 aaPredicted RBP22.02■■□□□ 1.12
LSM6-202ENST00000502781 FAM205BPQ63HN1 556 aa22.02■■□□□ 1.12
LSM6-202ENST00000502781 ZNF627Q7L945 461 aa22.02■■□□□ 1.12
LSM6-202ENST00000502781 TMEM179BQ7Z7N9 219 aa22.02■■□□□ 1.12
LSM6-202ENST00000502781 ARIH2OSQ8N7S6 290 aa22.02■■□□□ 1.12
LSM6-202ENST00000502781 NOXO1Q8NFA2 376 aa22.02■■□□□ 1.12
LSM6-202ENST00000502781 MAGEE2Q8TD90 523 aaPredicted RBP22.02■■□□□ 1.12
LSM6-202ENST00000502781 HDAC2Q92769 488 aaKnown RBP22.02■■□□□ 1.12
LSM6-202ENST00000502781 POLDIP3Q9BY77 421 aaKnown RBP22.02■■□□□ 1.12
LSM6-202ENST00000502781 ULBP2Q9BZM5 246 aa22.02■■□□□ 1.12
LSM6-202ENST00000502781 NDEL1Q9GZM8 345 aa22.02■■□□□ 1.12
LSM6-202ENST00000502781 NTN4Q9HB63 628 aa22.02■■□□□ 1.12
LSM6-202ENST00000502781 SLC17A5Q9NRA2 495 aa22.02■■□□□ 1.12
LSM6-202ENST00000502781 AP4S1Q9Y587 144 aa22.02■■□□□ 1.12
LSM6-202ENST00000502781 SLC25A15Q9Y619 301 aa22.02■■□□□ 1.12
LSM6-202ENST00000502781 CACNA1DQ01668 2161 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 ZNF99A8MXY4 864 aaPredicted RBP22.01■■□□□ 1.11
LSM6-202ENST00000502781 GNGT2O14610 69 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 TIPRLO75663 272 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 HRGP04196 525 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 CDH2P19022 906 aaPredicted RBP22.01■■□□□ 1.11
LSM6-202ENST00000502781 LOXP28300 417 aaPredicted RBP22.01■■□□□ 1.11
LSM6-202ENST00000502781 RPL4P36578 427 aaKnown RBP22.01■■□□□ 1.11
LSM6-202ENST00000502781 ERVK-25P63136 954 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 ARF1P84077 181 aaKnown RBP22.01■■□□□ 1.11
LSM6-202ENST00000502781 TOP3AQ13472 1001 aaPredicted RBP22.01■■□□□ 1.11
LSM6-202ENST00000502781 PPA1Q15181 289 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 RFX4Q33E94 735 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 ANKRD16Q6P6B7 361 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 DPY19L2P2Q6ZN68 376 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 ZNF620Q6ZNG0 422 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 AQP11Q8NBQ7 271 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 OR52D1Q9H346 318 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 MGAT4BQ9UQ53 548 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 ADAM18Q9Y3Q7 739 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 FBN2P35556 2912 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 DCHS2Q6V1P9 2916 aa22.01■■□□□ 1.11
LSM6-202ENST00000502781 DEAF1O75398 565 aaPredicted RBP22■■□□□ 1.11
LSM6-202ENST00000502781 OR10G2Q8NGC3 310 aa22■■□□□ 1.11
LSM6-202ENST00000502781 FANK1Q8TC84 345 aa22■■□□□ 1.11
LSM6-202ENST00000502781 GIPC3Q8TF64 312 aa22■■□□□ 1.11
LSM6-202ENST00000502781 MUCL1Q96DR8 90 aa22■■□□□ 1.11
LSM6-202ENST00000502781 ALG12Q9BV10 488 aa22■■□□□ 1.11
LSM6-202ENST00000502781 ITPR2Q14571 2701 aa22■■□□□ 1.11
LSM6-202ENST00000502781 A6NIZ1 184 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 APEHP13798 732 aaKnown RBP21.99■■□□□ 1.11
LSM6-202ENST00000502781 HOXB1P14653 301 aaPredicted RBP21.99■■□□□ 1.11
LSM6-202ENST00000502781 ACVR1BP36896 505 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 CLRN1P58418 232 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 RAP1BP61224 184 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 RAP1AP62834 184 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 KPNB1Q14974 876 aaKnown RBP21.99■■□□□ 1.11
LSM6-202ENST00000502781 TBRG1Q3YBR2 411 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 HIKESHIQ53FT3 197 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 BEX5Q5H9J7 111 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 CD300LDQ6UXZ3 194 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 RASSF6Q6ZTQ3 369 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 WFDC8Q8IUA0 241 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 SYT14Q8NB59 555 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 Q96M85 177 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 IL20Q9NYY1 176 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 GRHPRQ9UBQ7 328 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 IL20RAQ9UHF4 553 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 AMDHD2Q9Y303 409 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 CDH10Q9Y6N8 788 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 ARPC4-TTLL3A0A0A6YYG9 625 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 DHHO43323 396 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 TXNDC12O95881 172 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 QDPRP09417 244 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 SDHAP31040 664 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 ATP6AP1Q15904 470 aa21.99■■□□□ 1.11
LSM6-202ENST00000502781 C10orf128Q5T292 105 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms