RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 FAM69AQ5T7M9 428 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 C1QL4Q86Z23 238 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 ZNF584Q8IVC4 421 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 CLIP4Q8N3C7 705 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 SYT14Q8NB59 555 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 DEFB108BQ8NET1 73 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 TAAR8Q969N4 342 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 TESCQ96BS2 214 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 ASPNQ9BXN1 380 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 MMP27Q9H306 513 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 AKTIPQ9H8T0 292 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 NKIRAS2Q9NYR9 191 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 ZNF224Q9NZL3 707 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 TESQ9UGI8 421 aaKnown RBP9.9□□□□□ -0.82
CDK9-205ENST00000498339 LEF1Q9UJU2 399 aaPredicted RBP9.9□□□□□ -0.82
CDK9-205ENST00000498339 ZNF232Q9UNY5 417 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 IGLV3-9A0A075B6K5 115 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 TRAV36DV7A0A075B6V5 113 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 PLSCR5A0PG75 271 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 TMEM247A6NEH6 219 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 ALX3O95076 343 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 HLA-DOBP13765 273 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 ZNF250P15622 560 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 AHCYP23526 432 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 ARRB2P32121 409 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 CDKN2CP42773 168 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 CRATP43155 626 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 CSNK1A1P48729 337 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 ZNF81P51508 661 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 ZNF154Q13106 437 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 PMS2P3Q13401 168 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 OCLNQ16625 522 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 MOGQ16653 247 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 TBC1D28Q2M2D7 210 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 SMU1Q2TAY7 513 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 KLF17Q5JT82 389 aaPredicted RBP9.89□□□□□ -0.83
CDK9-205ENST00000498339 C5orf46Q6UWT4 87 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 JAZF1Q86VZ6 243 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 PAQR4Q8N4S7 273 aaPredicted RBP9.89□□□□□ -0.83
CDK9-205ENST00000498339 CPEB3Q8NE35 698 aaKnown RBP9.89□□□□□ -0.83
CDK9-205ENST00000498339 ZNF519Q8TB69 540 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 WFDC12Q8WWY7 111 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 LRR1Q96L50 414 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 C16orf45Q96MC5 204 aaPredicted RBP9.89□□□□□ -0.83
CDK9-205ENST00000498339 CCDC115Q96NT0 180 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 BCL2L14Q9BZR8 327 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 MMP26Q9NRE1 261 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 TNFRSF19Q9NS68 423 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 PDP1Q9P0J1 537 aaPredicted RBP9.89□□□□□ -0.83
CDK9-205ENST00000498339 SLC17A7Q9P2U7 560 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 BTNL2Q9UIR0 455 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 PRDM4Q9UKN5 801 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 NOTCH1P46531 2555 aa9.89□□□□□ -0.83
CDK9-205ENST00000498339 PPIAL4EA0A075B759 164 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 PPIAL4CA0A0B4J2A2 164 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 PPIAL4DF5H284 164 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 CLDN34H7C241 214 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 TIMM23O14925 209 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 ENTPD5O75356 428 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 SPAG7O75391 227 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 FARS2O95363 451 aaKnown RBP9.88□□□□□ -0.83
CDK9-205ENST00000498339 KRT75O95678 551 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 HPRP00739 348 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 IGHMP01871 453 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 CRYBA1P05813 215 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 PPIAL4FP0DN26 164 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 TMEM53Q6P2H8 277 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 ZNF627Q7L945 461 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 SKA3Q8IX90 412 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 PARP8Q8N3A8 854 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 SLC22A24Q8N4F4 322 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 C10orf53Q8N6V4 93 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 KIR3DL3Q8N743 410 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 ADPRHL1Q8NDY3 354 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 OR1J2Q8NGS2 313 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 OR1J1Q8NGS3 322 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 FGFBP3Q8TAT2 258 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 TXNDC15Q96J42 360 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 SH3GL3Q99963 347 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 SPATA9Q9BWV2 254 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 EGLN1Q9GZT9 426 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 LRMDAQ9H2I8 198 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 C1orf198Q9H425 327 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 PPCSQ9HAB8 311 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 BEX1Q9HBH7 125 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 SELENONQ9NZV5 590 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 WNK1Q9H4A3 2382 aa9.88□□□□□ -0.83
CDK9-205ENST00000498339 A0A087WUJ7 227 aa9.87□□□□□ -0.83
CDK9-205ENST00000498339 IQCMA0A1B0GVH7 501 aa9.87□□□□□ -0.83
CDK9-205ENST00000498339 MDFIC2A0A1B0GVS7 189 aa9.87□□□□□ -0.83
CDK9-205ENST00000498339 MS4A18H0YCH9 400 aa9.87□□□□□ -0.83
CDK9-205ENST00000498339 ZNF500O60304 480 aaPredicted RBP9.87□□□□□ -0.83
CDK9-205ENST00000498339 ANP32DO95626 131 aa9.87□□□□□ -0.83
CDK9-205ENST00000498339 PTHP01270 115 aa9.87□□□□□ -0.83
CDK9-205ENST00000498339 IGHV1-46P01743 117 aa9.87□□□□□ -0.83
CDK9-205ENST00000498339 SBK2P0C263 348 aa9.87□□□□□ -0.83
CDK9-205ENST00000498339 ETFAP13804 333 aa9.87□□□□□ -0.83
CDK9-205ENST00000498339 CCNOP22674 350 aa9.87□□□□□ -0.83
CDK9-205ENST00000498339 UCP2P55851 309 aa9.87□□□□□ -0.83
CDK9-205ENST00000498339 RAG2P55895 527 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms