RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 HMGN1P05114 100 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 PGA4P0DJD7 388 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 PGA3P0DJD8 388 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 NR2C1P13056 603 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 CSNK1A1P48729 337 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 CLRN1P58418 232 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 SLC25A35Q3KQZ1 300 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 ZIK1Q3SY52 487 aaPredicted RBP19.24■□□□□ 0.67
C9orf3-222ENST00000496567 XKRXQ6PP77 449 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.24■□□□□ 0.67
C9orf3-222ENST00000496567 MRGPRGQ86SM5 289 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 JAZF1Q86VZ6 243 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 LIX1LQ8IVB5 337 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 C20orf196Q8IYI0 205 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 UBE2J2Q8N2K1 259 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 GPR137CQ8N3F9 429 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 IQCF1Q8N6M8 205 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 OR6N1Q8NGY5 312 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 FNDC8Q8TC99 324 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 ALG12Q9BV10 488 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 MRPL13Q9BYD1 178 aaKnown RBP19.24■□□□□ 0.67
C9orf3-222ENST00000496567 PRRG3Q9BZD7 231 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 TOR3AQ9H497 397 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 B3GAT2Q9NPZ5 323 aa19.24■□□□□ 0.67
C9orf3-222ENST00000496567 NCOA6Q14686 2063 aaPredicted RBP19.24■□□□□ 0.67
C9orf3-222ENST00000496567 ZAR1LA6NP61 321 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 EEF1E1-BLOC1S5C9J1V9 151 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 EEF1E1O43324 174 aaKnown RBP19.23■□□□□ 0.67
C9orf3-222ENST00000496567 AHCYL1O43865 530 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 ZG16O60844 167 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 SNAP29O95721 258 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 RUNX1T1Q06455 604 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 MESTQ5EB52 335 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 SLC35F1Q5T1Q4 408 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 TSPO2Q5TGU0 170 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 FBXW9Q5XUX1 488 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 BEND4Q6ZU67 534 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 ABHD12BQ7Z5M8 362 aaPredicted RBP19.23■□□□□ 0.67
C9orf3-222ENST00000496567 ZNF808Q8N4W9 903 aaPredicted RBP19.23■□□□□ 0.67
C9orf3-222ENST00000496567 ZNF610Q8N9Z0 462 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 NOXO1Q8NFA2 376 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 LILRB4Q8NHJ6 448 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 CA5BP1Q8WTZ4 195 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 HDAC2Q92769 488 aaKnown RBP19.23■□□□□ 0.67
C9orf3-222ENST00000496567 KCNK17Q96T54 332 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 OPN3Q9H1Y3 402 aaPredicted RBP19.23■□□□□ 0.67
C9orf3-222ENST00000496567 KLHL21Q9UJP4 597 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 FOXD3Q9UJU5 478 aaPredicted RBP19.23■□□□□ 0.67
C9orf3-222ENST00000496567 RELNP78509 3460 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 IFNGP01579 166 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 HIST1H1CP16403 213 aaKnown RBP19.23■□□□□ 0.67
C9orf3-222ENST00000496567 EDNRAP25101 427 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 EPHA2P29317 976 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 POLR2IP36954 125 aaKnown RBP19.23■□□□□ 0.67
C9orf3-222ENST00000496567 ITGADQ13349 1161 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 TMEM236Q5W0B7 351 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 ACSM5Q6NUN0 579 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 WDFY1Q8IWB7 410 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 RELL2Q8NC24 303 aaPredicted RBP19.23■□□□□ 0.67
C9orf3-222ENST00000496567 TMEM54Q969K7 222 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 SLC38A2Q96QD8 506 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 RBP7Q96R05 134 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 SNX18Q96RF0 628 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 GRIP2Q9C0E4 1043 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 SLC7A10Q9NS82 523 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 GLTPQ9NZD2 209 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 MALT1Q9UDY8 824 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 PRSS50Q9UI38 385 aa19.23■□□□□ 0.67
C9orf3-222ENST00000496567 PRSS37A4D1T9 235 aa19.22■□□□□ 0.67
C9orf3-222ENST00000496567 IGHV3-9P01782 118 aa19.22■□□□□ 0.67
C9orf3-222ENST00000496567 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.22■□□□□ 0.67
C9orf3-222ENST00000496567 CD47Q08722 323 aa19.22■□□□□ 0.67
C9orf3-222ENST00000496567 SLX4IPQ5VYV7 408 aa19.22■□□□□ 0.67
C9orf3-222ENST00000496567 Q6ZT83 130 aa19.22■□□□□ 0.67
C9orf3-222ENST00000496567 LUZP2Q86TE4 346 aa19.22■□□□□ 0.67
C9orf3-222ENST00000496567 SYT14Q8NB59 555 aa19.22■□□□□ 0.67
C9orf3-222ENST00000496567 OR52E2Q8NGJ4 325 aa19.22■□□□□ 0.67
C9orf3-222ENST00000496567 OR4K13Q8NH42 304 aa19.22■□□□□ 0.67
C9orf3-222ENST00000496567 CMC2Q9NRP2 79 aa19.22■□□□□ 0.67
C9orf3-222ENST00000496567 ASB6Q9NWX5 421 aa19.22■□□□□ 0.67
C9orf3-222ENST00000496567 JKAMPQ9P055 326 aa19.22■□□□□ 0.67
C9orf3-222ENST00000496567 RIIAD1A6NNX1 92 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 A8MXE2 369 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 H0YJX3 145 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 UPK3AO75631 287 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 AGFG2O95081 481 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 RENP00797 406 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 VHLP40337 213 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 CDKN2AP42771 156 aaKnown RBP19.21■□□□□ 0.67
C9orf3-222ENST00000496567 HIST3H3Q16695 136 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 THEM4Q5T1C6 240 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 LEG1Q6P5S2 330 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 ITLN2Q8WWU7 325 aaPredicted RBP19.21■□□□□ 0.67
C9orf3-222ENST00000496567 PLEKHA8Q96JA3 519 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 MBOAT4Q96T53 435 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 ULBP2Q9BZM5 246 aa19.21■□□□□ 0.67
C9orf3-222ENST00000496567 VSX1Q9NZR4 365 aaPredicted RBP19.21■□□□□ 0.67
C9orf3-222ENST00000496567 ALPK2Q86TB3 2170 aa19.21■□□□□ 0.66
C9orf3-222ENST00000496567 DIDO1Q9BTC0 2240 aaKnown RBP19.2■□□□□ 0.66
C9orf3-222ENST00000496567 PCNX1Q96RV3 2341 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms