RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 hCG_2039718K7EN88 272 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 MRASO14807 208 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 PEX14O75381 377 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 MT-ATP6P00846 226 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 TROVE2P10155 538 aaKnown RBP eCLIP8.3□□□□□ -1.08
MSH5-218ENST00000494646 FUT1P19526 365 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 USF1P22415 310 aaPredicted RBP8.3□□□□□ -1.08
MSH5-218ENST00000494646 OR1E2P47887 323 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 TAS2R41P59536 307 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 ZP4Q12836 540 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 PIN1Q13526 163 aaPredicted RBP8.3□□□□□ -1.08
MSH5-218ENST00000494646 GSG1Q2KHT4 349 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 C3orf36Q3SXR2 165 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 IQCCQ4KMZ1 466 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 C6orf52Q5T4I8 152 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 CYB5R2Q6BCY4 276 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 LRFN4Q6PJG9 635 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 DEF8Q6ZN54 512 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 CARM1Q86X55 608 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 CALHM3Q86XJ0 350 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 SKA3Q8IX90 412 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 CCDC36Q8IYA8 594 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 FAM169BQ8N8A8 192 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 NUP37Q8NFH4 326 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 PFN4Q8NHR9 129 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 TMEM54Q969K7 222 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 ZNF75AQ96N20 296 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 ZNF583Q96ND8 569 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 DOK1Q99704 481 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 FOXB1Q99853 325 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 SH3GL1Q99961 368 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 RAB1BQ9H0U4 201 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 PLK3Q9H4B4 646 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 MEPEQ9NQ76 525 aaPredicted RBP8.3□□□□□ -1.08
MSH5-218ENST00000494646 SAR1AQ9NR31 198 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 GLTPQ9NZD2 209 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 ZNF224Q9NZL3 707 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 FZR1Q9UM11 496 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 FKBP7Q9Y680 259 aa8.3□□□□□ -1.08
MSH5-218ENST00000494646 LYNX1G3V0Z9 82 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 F13BP05160 661 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 ADRA2AP08913 450 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 QDPRP09417 244 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 IGHV4-31P0DP07 118 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 LYNX1P0DP58 116 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 TCN1P20061 433 aaPredicted RBP8.29□□□□□ -1.08
MSH5-218ENST00000494646 NR4A2P43354 598 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 GIPRP48546 466 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 UGT2B15P54855 530 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 VLDLRP98155 873 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 MYBPC1Q00872 1141 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 GUCY1A3Q02108 690 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 SNTB2Q13425 540 aaKnown RBP8.29□□□□□ -1.08
MSH5-218ENST00000494646 RAB39AQ14964 217 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 LAPTM4AQ15012 233 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 EFNB3Q15768 340 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 CHRFAM7AQ494W8 412 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 LRP11Q86VZ4 500 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 SNX32Q86XE0 403 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 CDK20Q8IZL9 346 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 POU5F2Q8N7G0 328 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 ARIH2OSQ8N7S6 290 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 IL17RDQ8NFM7 739 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 OR6X1Q8NH79 312 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 TMEM255BQ8WV15 326 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 RASSF5Q8WWW0 418 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 ZNF566Q969W8 418 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 TPD52L3Q96J77 140 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 MPP4Q96JB8 637 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 ZNF347Q96SE7 839 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 SH3GL3Q99963 347 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 PIMREGQ9BSJ6 248 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 RNF121Q9H920 327 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 MOV10Q9HCE1 1003 aaKnown RBP8.29□□□□□ -1.08
MSH5-218ENST00000494646 GID8Q9NWU2 228 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 ARMCX1Q9P291 453 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 GMPR2Q9P2T1 348 aaKnown RBP8.29□□□□□ -1.08
MSH5-218ENST00000494646 RIMS3Q9UJD0 308 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 ZNF229Q9UJW7 825 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 CMAHPQ9Y471 501 aa8.29□□□□□ -1.08
MSH5-218ENST00000494646 IGHV4-61A0A0C4DH41 118 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 LOC390937A0A1W2PQ73 354 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 VWC2LB2RUY7 222 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 FXYD1O00168 92 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 DHHO43323 396 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 PDE5AO76074 875 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 STAMBPO95630 424 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 RAB36O95755 333 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 BCL10O95999 233 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 MT-ND1P03886 318 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 IGFBP1P08833 259 aaPredicted RBP8.28□□□□□ -1.08
MSH5-218ENST00000494646 CSF3P09919 207 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 ASAH2BP0C7U1 165 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 CCL2P13500 99 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 ZNF35P13682 527 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 DAOP14920 347 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 ZNF14P17017 642 aaPredicted RBP8.28□□□□□ -1.08
MSH5-218ENST00000494646 NR4A1P22736 598 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 KDELR2P33947 212 aa8.28□□□□□ -1.08
MSH5-218ENST00000494646 AQP2P41181 271 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms