RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ZNF701Q9NV72 531 aaPredicted RBP7.08□□□□□ -1.28
RIF1-211ENST00000494333 CISD1Q9NZ45 108 aaKnown RBP7.08□□□□□ -1.28
RIF1-211ENST00000494333 NPAP1Q9NZP6 1156 aa7.08□□□□□ -1.28
RIF1-211ENST00000494333 RPS6KB2Q9UBS0 482 aa7.08□□□□□ -1.28
RIF1-211ENST00000494333 MALT1Q9UDY8 824 aa7.08□□□□□ -1.28
RIF1-211ENST00000494333 NDUFAF1Q9Y375 327 aa7.08□□□□□ -1.28
RIF1-211ENST00000494333 GMEB1Q9Y692 573 aa7.08□□□□□ -1.28
RIF1-211ENST00000494333 ITPR3Q14573 2671 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 TRBV5-3A0A0A0MS03 114 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 A0A0G2JND7 137 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 TRIM64A6NGJ6 449 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 TRIM64BA6NI03 449 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 SHISA9B4DS77 424 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 M0R1B8 84 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 PDLIM1O00151 329 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 EDF1O60869 148 aaKnown RBP7.07□□□□□ -1.28
RIF1-211ENST00000494333 TMCC2O75069 709 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 NPIPB7O75200 414 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 SLC43A1O75387 559 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 KRT33AO76009 404 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 NCR1O76036 304 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 VAMP5O95183 116 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 AHSA1O95433 338 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 ITGA5P08648 1049 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 PAX1P15863 534 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 CDH2P19022 906 aaPredicted RBP7.07□□□□□ -1.28
RIF1-211ENST00000494333 ZFP36P26651 326 aaKnown RBP7.07□□□□□ -1.28
RIF1-211ENST00000494333 AQP1P29972 269 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 PRKAR1BP31321 381 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 RPS5P46782 204 aaKnown RBP7.07□□□□□ -1.28
RIF1-211ENST00000494333 ZNF83P51522 516 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 P2RY4P51582 365 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 TGFBR3Q03167 851 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 EGR4Q05215 589 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 SCARB2Q14108 478 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 PGGHGQ32M88 737 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 GLIPR1L2Q4G1C9 344 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 RUNDC3AQ59EK9 446 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 KLHL17Q6TDP4 642 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 TMEM108Q6UXF1 575 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 CLEC9AQ6UXN8 241 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 CREB3L2Q70SY1 520 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 KRT73Q86Y46 540 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 KDM8Q8N371 416 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 LSMEM1Q8N8F7 131 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 OR9K2Q8NGE7 335 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 MFSD8Q8NHS3 518 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 TBC1D15Q8TC07 691 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 TMEM45BQ96B21 275 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 TRMT61AQ96FX7 289 aaKnown RBP7.07□□□□□ -1.28
RIF1-211ENST00000494333 ZNF607Q96SK3 696 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 KRTAP9-3Q9BYQ3 159 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 TMEM38AQ9H6F2 299 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 LEF1Q9UJU2 399 aaPredicted RBP7.07□□□□□ -1.28
RIF1-211ENST00000494333 CORO2BQ9UQ03 480 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 MAGED1Q9Y5V3 778 aaPredicted RBP7.07□□□□□ -1.28
RIF1-211ENST00000494333 SLC25A15Q9Y619 301 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 CELSR1Q9NYQ6 3014 aa7.07□□□□□ -1.28
RIF1-211ENST00000494333 A0A1B0GWA3 101 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 PRORSD1PA6NEY8 169 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 M0QX08 132 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 OVOL3O00110 214 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 ANGPT2O15123 496 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 SERPINB7O75635 380 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 MFN2O95140 757 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 LY6G6DO95868 133 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 PTNP21246 168 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 PTAFRP25105 342 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 HTR2AP28223 471 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 GTF2E2P29084 291 aaKnown RBP7.06□□□□□ -1.28
RIF1-211ENST00000494333 MPGP29372 298 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 CDKN1AP38936 164 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 LTBQ06643 244 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 ALG10BQ5I7T1 473 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 METTL21CQ5VZV1 264 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 NIPAL3Q6P499 406 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 ULK3Q6PHR2 472 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 DHRS4L2Q6PKH6 230 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 SLC22A25Q6T423 547 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 COMTD1Q86VU5 262 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 ARMC8Q8IUR7 673 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 WDR31Q8NA23 367 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 POMGNT2Q8NAT1 580 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 PPP1R35Q8TAP8 253 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 DNAJA4Q8WW22 397 aaPredicted RBP7.06□□□□□ -1.28
RIF1-211ENST00000494333 KTI12Q96EK9 354 aaPredicted RBP7.06□□□□□ -1.28
RIF1-211ENST00000494333 RADILQ96JH8 1075 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 ANKRD27Q96NW4 1050 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 CGREF1Q99674 301 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 WFDC6Q9BQY6 131 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 PTDSS2Q9BVG9 487 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 AMBRA1Q9C0C7 1298 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 SLCO5A1Q9H2Y9 848 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 C12orf10Q9HB07 376 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 TMEM27Q9HBJ8 222 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 AKIP1Q9NQ31 210 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 SLC17A5Q9NRA2 495 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 FAIMQ9NVQ4 179 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 SLC13A4Q9UKG4 626 aa7.06□□□□□ -1.28
RIF1-211ENST00000494333 POU2F3Q9UKI9 436 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms