RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 IFNGR2P38484 337 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZNF83P51522 516 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 RPL27P61353 136 aaKnown RBP14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 RUNX1T1Q06455 604 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 BSPH1Q075Z2 132 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ARMC4Q5T2S8 1044 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 KLHL17Q6TDP4 642 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZNF704Q6ZNC4 412 aaPredicted RBP14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 SPATA24Q86W54 205 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 RSRC1Q96IZ7 334 aaKnown RBP14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TMEM204Q9BSN7 226 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 LRMDAQ9H2I8 198 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 LIME1Q9H400 295 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 SLC7A8Q9UHI5 535 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 SIGLEC7Q9Y286 467 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 RNF115Q9Y4L5 304 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 APCP25054 2843 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 DPRXA6NFQ7 191 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 UNC119BA6NIH7 251 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 SEC14L2O76054 403 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 PLAUP00749 431 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 HOXB6P17509 224 aaKnown RBP14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 RPL4P36578 427 aaKnown RBP14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 HMGA2P52926 109 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 HIST3H3Q16695 136 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 FAM205BPQ63HN1 556 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 OR2T5Q6IEZ7 315 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TMEM108Q6UXF1 575 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 PAMR1Q6UXH9 720 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZER1Q7Z7L7 766 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 OR2T29Q8NH02 315 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CANT1Q8WVQ1 401 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TSPAN32Q96QS1 320 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 FOXB1Q99853 325 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 C1QTNF6Q9BXI9 259 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 MRPL13Q9BYD1 178 aaKnown RBP14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 MMADHCQ9H3L0 296 aaPredicted RBP14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 UBTD1Q9HAC8 227 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ST6GALNAC2Q9UJ37 374 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZNF346Q9UL40 294 aaKnown RBP14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 EDARQ9UNE0 448 aa14.24□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TCRBV3S1A0A5B6 114 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 M0R1B8 84 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 NDUFB2O95178 105 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CD14P08571 375 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 QDPRP09417 244 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZNF26P17031 533 aaPredicted RBP14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 PAX7P23759 505 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 FPR3P25089 353 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ACVR1BP36896 505 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 LRFN4Q6PJG9 635 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZNF813Q6ZN06 617 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CCDC121Q6ZUS5 278 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZNF627Q7L945 461 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 LINC00471Q8N535 108 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 SYT14Q8NB59 555 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 OR4C15Q8NGM1 316 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZNF519Q8TB69 540 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 GNPDA2Q8TDQ7 276 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 HDAC2Q92769 488 aaKnown RBP14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 NINJ1Q92982 152 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 GPA33Q99795 319 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 KATNB1Q9BVA0 655 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CHID1Q9BWS9 393 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 REEP1Q9H902 201 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 VNN3Q9NY84 501 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ITPR2Q14571 2701 aa14.23□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 A6NIZ1 184 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ABCD4O14678 606 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 DHHO43323 396 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 PTP4A3O75365 173 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CCNB2O95067 398 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 RAF1P04049 648 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 NR2C1P13056 603 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 B4GALT1P15291 398 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 PTAFRP25105 342 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CD40P25942 277 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 RAP1BP61224 184 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 RAP1AP62834 184 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ERVK-25P63136 954 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TUBA1BP68363 451 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TUBA4AP68366 448 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CBX1P83916 185 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 MYBPC1Q00872 1141 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CD47Q08722 323 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ADAM5Q6NVV9 412 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 C1orf94Q6P1W5 598 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 PGBD2Q6P3X8 592 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TUBA1AQ71U36 451 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CCDC36Q8IYA8 594 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 OR9Q2Q8NGE9 314 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 FANK1Q8TC84 345 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 MCHR2Q969V1 340 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 GPX7Q96SL4 187 aaPredicted RBP14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 KCNK17Q96T54 332 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ALG12Q9BV10 488 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 MOV10Q9HCE1 1003 aaKnown RBP14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 GRHPRQ9UBQ7 328 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 MGAT4BQ9UQ53 548 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 PLEKHA6Q9Y2H5 1048 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms