RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	SNX29P2	Q8IUI4	249 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	TIGD4	Q8IY51	512 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	TMEFF1	Q8IYR6	380 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ZFP41	Q8N8Y5	198 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	LRRC75A	Q8NAA5	344 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	CYB561A3	Q8NBI2	242 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	OR4N2	Q8NGD1	307 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	OTOS	Q8NHW6	89 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	C1orf216	Q8TAB5	229 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ZFAND1	Q8TCF1	268 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	CCDC107	Q8WV48	283 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	CAPSL	Q8WWF8	208 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	HAVCR1	Q96D42	359 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	OMA1	Q96E52	524 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ST6GAL2	Q96JF0	529 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	TBX5	Q99593	518 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	TIMP4	Q99727	224 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	CMKLR1	Q99788	373 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	NUDT16L1	Q9BRJ7	211 aa	Known RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	SPRTN	Q9H040	489 aa	Predicted RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	RNF32	Q9H0A6	362 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	NXF5	Q9H1B4	397 aa	Known RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	MOB1A	Q9H8S9	216 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	MED20	Q9H944	212 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	DUX4	Q9UBX2	424 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	STEAP1	Q9UHE8	339 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	ZMIZ1	Q9ULJ6	1067 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	RPH3A	Q9Y2J0	694 aa	Predicted RBP	5.75	□□□□□ -1.49
FN1-223	ENST00000490833	CLDN16	Q9Y5I7	305 aa		5.75	□□□□□ -1.49
FN1-223	ENST00000490833	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	TMED7-TICAM2	A0A0A6YYA0	188 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	NPIPA5	A0A0B4J1W7	369 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	TEX13C	A0A0J9YWL9	993 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	CENPVL1	A0A0U1RR11	272 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	UBE2QL1	A1L167	161 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	GJE1	A6NN92	205 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	C1QTNF9B	B2RNN3	333 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	NPIPA7	E9PJI5	369 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	SUSD5	O60279	629 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	FADS1	O60427	444 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	NPIPB7	O75200	414 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	KHDRBS3	O75525	346 aa	Known RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	CDC123	O75794	336 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	RGS11	O94810	467 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	HLA-DQA2	P01906	255 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	BGLAP	P02818	100 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	WNT1	P04628	370 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	IL5	P05113	134 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	KLK3	P07288	261 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	MRPL3	P09001	348 aa	Known RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	H2AFB2	P0C5Z0	115 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	UBC	P0CG48	685 aa	Known RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	NPIPA8	P0DM63	369 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	THBS2	P35442	1172 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	AQP2	P41181	271 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	CDKN2A	P42771	156 aa	Known RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	NR0B1	P51843	470 aa	Known RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	EMP2	P54851	167 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	RNF4	P78317	190 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	GALK2	Q01415	458 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	RPL18	Q07020	188 aa	Known RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	GPR176	Q14439	515 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	ZMYND11	Q15326	602 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	EXT1	Q16394	746 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	COL28A1	Q2UY09	1125 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	DEFB133	Q30KQ1	61 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	DEFB110	Q30KQ9	67 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	NKAIN1	Q4KMZ8	207 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	TP53I3	Q53FA7	332 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	PLA1A	Q53H76	456 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	SLC25A53	Q5H9E4	307 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	TMEM69	Q5SWH9	247 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	LINC01590	Q5TEZ4	76 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	LIPN	Q5VXI9	398 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	RTL6	Q6ICC9	239 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	KLHL24	Q6TFL4	600 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	DGAT2L6	Q6ZPD8	337 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	KRT77	Q7Z794	578 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	ZAR1	Q86SH2	424 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	CELF2-AS1	Q8N7Q2	184 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF441	Q8N8Z8	693 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	LSM14A	Q8ND56	463 aa	Known RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	OR4M1	Q8NGD0	313 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	OR2G2	Q8NGZ5	317 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	GPR119	Q8TDV5	335 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	RNF128	Q8TEB7	428 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	CCDC74A	Q96AQ1	378 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	INTS12	Q96CB8	462 aa	Known RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF501	Q96CX3	271 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	CPNE2	Q96FN4	548 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	DERL3	Q96Q80	235 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	OR8B4	Q96RC9	309 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	GAL3ST4	Q96RP7	486 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	SLC25A21	Q9BQT8	299 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	HCAR1	Q9BXC0	346 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	ENKD1	Q9H0I2	346 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	ALX4	Q9H161	411 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	CLEC4M	Q9H2X3	399 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	SRA1	Q9HD15	236 aa	Known RBP	5.74	□□□□□ -1.49

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