RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 RAB35Q15286 201 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 TAF11Q15544 211 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 HIST3H3Q16695 136 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 FKBP9P1Q75LS8 142 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 PIGWQ7Z7B1 504 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 VTCN1Q7Z7D3 282 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 DPPA2Q7Z7J5 298 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 MRPL13Q9BYD1 178 aaKnown RBP16.52■□□□□ 0.24
MRPL55-230ENST00000489430 GSX1Q9H4S2 264 aaPredicted RBP16.52■□□□□ 0.24
MRPL55-230ENST00000489430 ZNF442Q9H7R0 627 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 INIPQ9NRY2 104 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 CA10Q9NS85 328 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 C20orf141Q9NUB4 165 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 ARL2BPQ9Y2Y0 163 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 PMF1-BGLAPU3KQ54 211 aa16.52■□□□□ 0.24
MRPL55-230ENST00000489430 PLCE1Q9P212 2302 aa16.52■□□□□ 0.23
MRPL55-230ENST00000489430 GMNNO75496 209 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 DCTN3O75935 186 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 SERPINA1P01009 418 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 NR2C1P13056 603 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 GNGT1P63211 74 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 TUBA1BP68363 451 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 TUBA4AP68366 448 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 SWI5Q1ZZU3 235 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 GSG1Q2KHT4 349 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 CLEC9AQ6UXN8 241 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 TUBA1AQ71U36 451 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 MDP1Q86V88 176 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 CYP4Z1Q86W10 505 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 WDFY1Q8IWB7 410 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 CIARTQ8N365 385 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-230ENST00000489430 FAM162AQ96A26 154 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 BPIFA2Q96DR5 249 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 LRRC37BQ96QE4 947 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 HIF3AQ9Y2N7 669 aa16.51■□□□□ 0.23
MRPL55-230ENST00000489430 UBL3O95164 117 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 SERPINF1P36955 418 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 CAPZA2P47755 286 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 IDH3GP51553 393 aaPredicted RBP16.5■□□□□ 0.23
MRPL55-230ENST00000489430 ZNF133P52736 654 aaPredicted RBP16.5■□□□□ 0.23
MRPL55-230ENST00000489430 TNK1Q13470 666 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 EFNB3Q15768 340 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 FXNQ16595 210 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 SPATS1Q496A3 300 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 LRFN4Q6PJG9 635 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 ANKS4BQ8N8V4 417 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 ACOT11Q8WXI4 607 aaPredicted RBP16.5■□□□□ 0.23
MRPL55-230ENST00000489430 HSH2DQ96JZ2 352 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 GORASP2Q9H8Y8 452 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 SMURF2Q9HAU4 748 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 MAN2C1Q9NTJ4 1040 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 NDE1Q9NXR1 346 aa16.5■□□□□ 0.23
MRPL55-230ENST00000489430 GMPR2Q9P2T1 348 aaKnown RBP16.5■□□□□ 0.23
MRPL55-230ENST00000489430 SAMD4AQ9UPU9 718 aaKnown RBP16.5■□□□□ 0.23
MRPL55-230ENST00000489430 ZNF503-AS2A6NEH8 195 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 B9A039 149 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 MCIDASD6RGH6 385 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 FFAR1O14842 300 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 DHHO43323 396 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 PRSS23O95084 383 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 FARS2O95363 451 aaKnown RBP16.49■□□□□ 0.23
MRPL55-230ENST00000489430 HLA-HP01893 362 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 F13BP05160 661 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 OR8G3PP0DMU2 310 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 B4GALT1P15291 398 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 ACVR1BP36896 505 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 AQP2P41181 271 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 SLC9A3P48764 834 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 SNRPD2P62316 118 aaKnown RBP16.49■□□□□ 0.23
MRPL55-230ENST00000489430 PRKCDQ05655 676 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 MST1LQ2TV78 715 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 ARMC4Q5T2S8 1044 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 GLYATQ6IB77 296 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 CDK20Q8IZL9 346 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 FAM156AQ8NDB6 213 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 FNDC8Q8TC99 324 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 ASB10Q8WXI3 467 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 ZNF75AQ96N20 296 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 TXNIPQ9H3M7 391 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 DCAF13Q9NV06 445 aaKnown RBP16.49■□□□□ 0.23
MRPL55-230ENST00000489430 TMEM38BQ9NVV0 291 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 ADA2Q9NZK5 511 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 GDF2Q9UK05 429 aaPredicted RBP16.49■□□□□ 0.23
MRPL55-230ENST00000489430 SNX13Q9Y5W8 968 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 ENPP4Q9Y6X5 453 aa16.49■□□□□ 0.23
MRPL55-230ENST00000489430 NIPBLQ6KC79 2804 aaeCLIP16.49■□□□□ 0.23
MRPL55-230ENST00000489430 IGHV2OR16-5A0A0B4J2B6 119 aa16.48■□□□□ 0.23
MRPL55-230ENST00000489430 SEC14L2O76054 403 aa16.48■□□□□ 0.23
MRPL55-230ENST00000489430 QDPRP09417 244 aa16.48■□□□□ 0.23
MRPL55-230ENST00000489430 CD79AP11912 226 aa16.48■□□□□ 0.23
MRPL55-230ENST00000489430 IFI30P13284 250 aa16.48■□□□□ 0.23
MRPL55-230ENST00000489430 HSD17B1P14061 328 aa16.48■□□□□ 0.23
MRPL55-230ENST00000489430 ACADSP16219 412 aa16.48■□□□□ 0.23
MRPL55-230ENST00000489430 ZNF14P17017 642 aaPredicted RBP16.48■□□□□ 0.23
MRPL55-230ENST00000489430 CALCRP30988 508 aa16.48■□□□□ 0.23
MRPL55-230ENST00000489430 ZNF84P51523 738 aa16.48■□□□□ 0.23
MRPL55-230ENST00000489430 MNAT1P51948 309 aa16.48■□□□□ 0.23
MRPL55-230ENST00000489430 EFNA4P52798 201 aa16.48■□□□□ 0.23
MRPL55-230ENST00000489430 NUDT6P53370 316 aa16.48■□□□□ 0.23
MRPL55-230ENST00000489430 CLRN1P58418 232 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms