RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 NANPQ8TBE9 248 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 GTF3AQ92664 365 aaKnown RBP9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 RAB39BQ96DA2 213 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 SLC41A3Q96GZ6 507 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 C1QTNF5Q9BXJ0 243 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 ROPN1BQ9BZX4 212 aaPredicted RBP9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 ZNF696Q9H7X3 374 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 ROPN1Q9HAT0 212 aaPredicted RBP9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 C12orf10Q9HB07 376 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 CACNG2Q9Y698 323 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 IGHV1-69-2A0A0G2JMI3 117 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 ZNF726A6NNF4 738 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 J3QLI3 93 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 ZNF500O60304 480 aaPredicted RBP9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 PRSS23O95084 383 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 IGHV2-5P01817 119 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 BGLAPP02818 100 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 IL6P05231 212 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 ZCCHC18P0CG32 403 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 AHCYP23526 432 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 CRYBB2P43320 205 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 RAD52P43351 418 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 CSNK1A1P48729 337 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 KLF3P57682 345 aaPredicted RBP9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 STX3Q13277 289 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 PMS2P3Q13401 168 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 SHISA2Q6UWI4 295 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 LSMEM1Q8N8F7 131 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 GLB1L3Q8NCI6 653 aaPredicted RBP9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 SYNPRQ8TBG9 265 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 SNX33Q8WV41 574 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 DNAJA4Q8WW22 397 aaPredicted RBP9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 SLC35B4Q969S0 331 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 MOGAT1Q96PD6 335 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 DUX5Q96PT3 197 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 SH3GL3Q99963 347 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 DENND2DQ9H6A0 471 aaPredicted RBP9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 C7orf69Q9H7B7 122 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 DDX28Q9NUL7 540 aaKnown RBP9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 OPN4Q9UHM6 478 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 WIPI2Q9Y4P8 454 aa9.2□□□□□ -0.94
PTP4A2-206ENST00000489313 TPD52L2O43399 206 aaKnown RBP9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 SLC22A3O75751 556 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 LCKP06239 509 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 HKR1P10072 659 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 ARAFP10398 606 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 SELENOVP59797 346 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 LCN2P80188 198 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 GLO1Q04760 184 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 PUDPQ08623 228 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 RBBP4Q09028 425 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 BST1Q10588 318 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 FOXL1Q12952 345 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 MPP2Q14168 576 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 TSTQ16762 297 aaKnown RBP9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 PCGF3Q3KNV8 242 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 C6orf10Q5SRN2 563 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 WDR88Q6ZMY6 472 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 USP51Q70EK9 711 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 SNX32Q86XE0 403 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 KIRREL3Q8IZU9 778 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 SLC22A24Q8N4F4 322 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 C10orf53Q8N6V4 93 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 SCAIQ8N9R8 606 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 ICA1LQ8NDH6 482 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 SLC30A7Q8NEW0 376 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 BBS10Q8TAM1 723 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 ITCHQ96J02 903 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 ASPNQ9BXN1 380 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 BCL2L10Q9HD36 194 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 A4GALTQ9NPC4 353 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 THUMPD1Q9NXG2 353 aaKnown RBP9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 GPR160Q9UJ42 338 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 FBXL3Q9UKT7 428 aa9.19□□□□□ -0.94
PTP4A2-206ENST00000489313 IGLV3-9A0A075B6K5 115 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 C5orf58C9J3I9 102 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 CLDN25C9JDP6 229 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 C11orf98E9PRG8 122 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 PLPP3O14495 311 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 TPST1O60507 370 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 FSHBP01225 129 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 ZNF250P15622 560 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 FPR2P25090 351 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 PRKAR1BP31321 381 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 BIDP55957 195 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 VSNL1P62760 191 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 RGNQ15493 299 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 PDCD4Q53EL6 469 aaKnown RBP9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 NXNQ6DKJ4 435 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 ULK3Q6PHR2 472 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 PIWIL3Q7Z3Z3 882 aaKnown RBP9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 PXKQ7Z7A4 578 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 SIGLECL1Q8N7X8 197 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 OR9I1Q8NGQ6 314 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 DVL3Q92997 716 aaPredicted RBP9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 ZBTB9Q96C00 473 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 SLC47A1Q96FL8 570 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 EPYCQ99645 322 aa9.18□□□□□ -0.94
PTP4A2-206ENST00000489313 CDH20Q9HBT6 801 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms