RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 Q96M85 177 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 PTGER4P35408 488 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 VHLLQ6RSH7 139 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 LANCL3Q6ZV70 420 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 HSD17B11Q8NBQ5 300 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 SLC7A6Q92536 515 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 PARP12Q9H0J9 701 aaKnown RBP16.23■□□□□ 0.19
NPHP4-209ENST00000489180 OCEL1Q9H607 264 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 RAB9BQ9NP90 201 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 OR52A1Q9UKL2 312 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 ETV7Q9Y603 341 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 ZNF74Q16587 644 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 TRMT12Q53H54 448 aaKnown RBP16.22■□□□□ 0.19
NPHP4-209ENST00000489180 CREB3L2Q70SY1 520 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 SLC30A7Q8NEW0 376 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 RNF141Q8WVD5 230 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 OR6C1Q96RD1 312 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 C1QTNF3Q9BXJ4 246 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 ASIC5Q9NY37 505 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 PCDHGA5Q9Y5G8 931 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 SLC2A1P11166 492 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 BAXQ07812 192 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 ATPAF1Q5TC12 328 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-209ENST00000489180 KANSL1Q7Z3B3 1105 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 PLPP5Q8NEB5 264 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 HMGN4O00479 90 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 NAGAP17050 411 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 TGFBR3Q03167 851 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 DUSP5Q16690 384 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 IAH1Q2TAA2 248 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-209ENST00000489180 PHLDA2Q53GA4 152 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 ADGRE4PQ86SQ3 457 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 TERB2Q8NHR7 220 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 TEX51A0A1B0GUA7 166 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 DDAH2O95865 285 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 NLRP8Q86W28 1048 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 OR5M1Q8NGP8 315 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 PISDQ9UG56 409 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 PURGQ9UJV8 347 aaKnown RBP16.22■□□□□ 0.19
NPHP4-209ENST00000489180 NUMBLQ9Y6R0 609 aa16.22■□□□□ 0.19
NPHP4-209ENST00000489180 SLC35E2P0CK97 266 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 CCR9P51686 369 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 ZNF385BQ569K4 471 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 FBXO46Q6PJ61 603 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-209ENST00000489180 GLIPR1L1Q6UWM5 242 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 ANKRD9Q96BM1 317 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-209ENST00000489180 DDOQ99489 341 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 WIF1Q9Y5W5 379 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 FITM1A5D6W6 292 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 PRAMEF4O60810 478 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 GLCEO94923 617 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 ACSM5Q6NUN0 579 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 TEAD3Q99594 435 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 MBNL1Q9NR56 388 aaKnown RBP16.21■□□□□ 0.19
NPHP4-209ENST00000489180 QPCTLQ9NXS2 382 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 SIGLEC6O43699 453 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 LGI1O95970 557 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 CD14P08571 375 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 TNFSF4P23510 183 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 GABREP78334 506 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 SAXO2Q658L1 398 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 BRICD5Q6PL45 260 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 C20orf24Q9BUV8 137 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 CALHM2Q9HA72 323 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 CAMK2BQ13554 666 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 MDGA2Q7Z553 956 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 SLC51BQ86UW2 128 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 NKX3-1Q99801 234 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-209ENST00000489180 HDAC8Q9BY41 377 aa16.21■□□□□ 0.19
NPHP4-209ENST00000489180 WSB2Q9NYS7 404 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-209ENST00000489180 NXT1Q9UKK6 140 aaKnown RBP16.21■□□□□ 0.19
NPHP4-209ENST00000489180 COA3Q9Y2R0 106 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-209ENST00000489180 HSD17B6O14756 317 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 FOLR1P15328 257 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 CNR1P21554 472 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 CXCL12P48061 93 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 MRPL19P49406 292 aaKnown RBP16.2■□□□□ 0.18
NPHP4-209ENST00000489180 BANF2Q9H503 90 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 LRIT2A6NDA9 550 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 CLDN1O95832 211 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 HOXA1P49639 335 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-209ENST00000489180 FAM219BQ5XKK7 198 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 GDPD3Q7L5L3 318 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 KIAA0907Q7Z7F0 614 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-209ENST00000489180 FJX1Q86VR8 437 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 DUSP23Q9BVJ7 150 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 ZNF416Q9BWM5 594 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 NDRG4Q9ULP0 352 aaKnown RBP16.2■□□□□ 0.18
NPHP4-209ENST00000489180 NOSIPQ9Y314 301 aaKnown RBP16.2■□□□□ 0.18
NPHP4-209ENST00000489180 IMPA2O14732 288 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 DPP4P27487 766 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 RNF4P78317 190 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 DGCR2P98153 550 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 TESK1Q15569 626 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 NXPE3Q969Y0 559 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 GFOD1Q9NXC2 390 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 MYH9P35579 1960 aaKnown RBP16.2■□□□□ 0.18
NPHP4-209ENST00000489180 ANKRD61A6NGH8 418 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 ZNF195O14628 629 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 MAGEB4O15481 346 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms