RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ZP4Q12836 540 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 SNTB2Q13425 540 aaKnown RBP12.14□□□□□ -0.47
VTI1A-206ENST00000489142 CARTPTQ16568 116 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 GSG1Q2KHT4 349 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 C3orf36Q3SXR2 165 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 PRIMA1Q86XR5 153 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 SLC15A3Q8IY34 581 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 SVOPLQ8N434 492 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 OR10H5Q8NGA6 315 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 OR6X1Q8NH79 312 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 MOSPD2Q8NHP6 518 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 FGFBP3Q8TAT2 258 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 TMEM239Q8WW34 195 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 FAM168AQ92567 244 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 TMEM54Q969K7 222 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 SGTBQ96EQ0 304 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 ELAC2Q9BQ52 826 aaKnown RBP12.14□□□□□ -0.47
VTI1A-206ENST00000489142 SLC19A3Q9BZV2 496 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 FAM107BQ9H098 131 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 B3GNT2Q9NY97 397 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 GLTPQ9NZD2 209 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 RHCGQ9UBD6 479 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 SNX13Q9Y5W8 968 aa12.14□□□□□ -0.47
VTI1A-206ENST00000489142 SH3PXD2BA1X283 911 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 J3KTA2 159 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 hCG_2039718K7EN88 272 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 NME4O00746 187 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 SLC22A2O15244 555 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 ZNF682O95780 498 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 BCL10O95999 233 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 PGA4P0DJD7 388 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 PGA3P0DJD8 388 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 BMP4P12644 408 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 NUDT2P50583 147 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 SLC7A2P52569 658 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 EFNA4P52798 201 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 SEC24CP53992 1094 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 RAB39AQ14964 217 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 LRFN4Q6PJG9 635 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 SPATA21Q7Z572 469 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 SKA3Q8IX90 412 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 ZCCHC24Q8N2G6 241 aaKnown RBP12.13□□□□□ -0.47
VTI1A-206ENST00000489142 FAM169BQ8N8A8 192 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 SYT14Q8NB59 555 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 RBM15BQ8NDT2 890 aaKnown RBP12.13□□□□□ -0.47
VTI1A-206ENST00000489142 OR4F15Q8NGB8 312 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 RP9Q8TA86 221 aaKnown RBP12.13□□□□□ -0.47
VTI1A-206ENST00000489142 ZNF566Q969W8 418 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 SLC25A44Q96H78 314 aaPredicted RBP12.13□□□□□ -0.47
VTI1A-206ENST00000489142 ZNF75AQ96N20 296 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 ZNF347Q96SE7 839 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 SH3GL3Q99963 347 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 YAE1D1Q9NRH1 226 aa12.13□□□□□ -0.47
VTI1A-206ENST00000489142 MCIDASD6RGH6 385 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 CXCR6O00574 342 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 GSTA4O15217 222 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 RAB36O95755 333 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 F12P00748 615 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-206ENST00000489142 TP53P04637 393 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-206ENST00000489142 QDPRP09417 244 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 NCK1P16333 377 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 ZNF14P17017 642 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-206ENST00000489142 PAX7P23759 505 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 RBM34P42696 430 aaKnown RBP12.12□□□□□ -0.47
VTI1A-206ENST00000489142 CLRN1P58418 232 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 SELENOWP63302 87 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 DAG1Q14118 895 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 MSMPQ1L6U9 139 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 ZNF627Q7L945 461 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 CCDC36Q8IYA8 594 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 CDK20Q8IZL9 346 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 NUP37Q8NFH4 326 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 C10orf105Q8TEF2 133 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 ASB10Q8WXI3 467 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 PLK3Q9H4B4 646 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 INIPQ9NRY2 104 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 FZR1Q9UM11 496 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 A4GNTQ9UNA3 340 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 MED31Q9Y3C7 131 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 JMJD1CQ15652 2540 aa12.12□□□□□ -0.47
VTI1A-206ENST00000489142 A0A1W2PRG6 482 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 KIAA1324LA8MWY0 1029 aaPredicted RBP12.11□□□□□ -0.47
VTI1A-206ENST00000489142 B9A039 149 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 CD5LO43866 347 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 CCDC22O60826 627 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 IGHG1P01857 330 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 NPR2P20594 1047 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 GSK3BP49841 420 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 DSCR9P59020 149 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 RAB1AP62820 205 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 TOP3AQ13472 1001 aaPredicted RBP12.11□□□□□ -0.47
VTI1A-206ENST00000489142 LAPTM4AQ15012 233 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 EFNB3Q15768 340 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 ARPINQ7Z6K5 226 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 IGFN1Q86VF2 1251 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 SLC22A24Q8N4F4 322 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 NOXO1Q8NFA2 376 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 OR4K5Q8NGD3 323 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 PRRC1Q96M27 445 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 POLR2J2Q9GZM3 115 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms