RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PIP5K1CO60331 668 aa21.68■■□□□ 1.06
HMGN1-217ENST00000489072 LSM11P83369 360 aaKnown RBP eCLIP21.68■■□□□ 1.06
HMGN1-217ENST00000489072 CHRNB3Q05901 458 aa21.68■■□□□ 1.06
HMGN1-217ENST00000489072 SLC25A44Q96H78 314 aaPredicted RBP21.68■■□□□ 1.06
HMGN1-217ENST00000489072 JMJD1CQ15652 2540 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 IGHV2OR16-5A0A0B4J2B6 119 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 SNX3O60493 162 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 F13BP05160 661 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 PGA4P0DJD7 388 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 PGA3P0DJD8 388 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 YAP1P46937 504 aaKnown RBP21.67■■□□□ 1.06
HMGN1-217ENST00000489072 NUDT6P53370 316 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 KRTAP1-1Q07627 177 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 RAB35Q15286 201 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 LRFN4Q6PJG9 635 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 LIPHQ8WWY8 451 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 LZICQ8WZA0 190 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 ZNF566Q969W8 418 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 ZNF75AQ96N20 296 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 MED31Q9Y3C7 131 aa21.67■■□□□ 1.06
HMGN1-217ENST00000489072 J3KTA2 159 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 GSTA4O15217 222 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 ZNF682O95780 498 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 BCL10O95999 233 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 TSPAN19P0C672 248 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 CD79AP11912 226 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 LSP1P33241 339 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 AQP2P41181 271 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 GYS2P54840 703 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 RUNX1T1Q06455 604 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 PIGFQ07326 219 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 ST3GAL3Q11203 375 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 ADIPOQQ15848 244 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 VHLLQ6RSH7 139 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 CBLL1Q75N03 491 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 OR4F15Q8NGB8 312 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 MOSPD2Q8NHP6 518 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 CMTM5Q96DZ9 223 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 MS4A3Q96HJ5 214 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 MAN2C1Q9NTJ4 1040 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 ABCD2Q9UBJ2 740 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 ABCA2Q9BZC7 2435 aa21.66■■□□□ 1.06
HMGN1-217ENST00000489072 IGHV4-30-2A0A087WSY4 118 aa21.65■■□□□ 1.06
HMGN1-217ENST00000489072 FFAR1O14842 300 aa21.65■■□□□ 1.06
HMGN1-217ENST00000489072 SERPINF1P36955 418 aa21.65■■□□□ 1.06
HMGN1-217ENST00000489072 PSME3P61289 254 aa21.65■■□□□ 1.06
HMGN1-217ENST00000489072 GSG1Q2KHT4 349 aa21.65■■□□□ 1.06
HMGN1-217ENST00000489072 NUP37Q8NFH4 326 aa21.65■■□□□ 1.06
HMGN1-217ENST00000489072 RHCGQ9UBD6 479 aa21.65■■□□□ 1.06
HMGN1-217ENST00000489072 PMF1-BGLAPU3KQ54 211 aa21.65■■□□□ 1.06
HMGN1-217ENST00000489072 SERPINA1P01009 418 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 IFNW1P05000 195 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 OR4A8P0C604 315 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 NCK1P16333 377 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 ZNF14P17017 642 aaPredicted RBP21.64■■□□□ 1.05
HMGN1-217ENST00000489072 PRDX6P30041 224 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 KRTAP21-3Q3LHN1 58 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 SKA3Q8IX90 412 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 OFCC1Q8IZS5 231 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 ZNF525Q8N782 197 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 OR10H5Q8NGA6 315 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 FGFBP3Q8TAT2 258 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 GEMIN6Q8WXD5 167 aaKnown RBP21.64■■□□□ 1.05
HMGN1-217ENST00000489072 ASB10Q8WXI3 467 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 HSH2DQ96JZ2 352 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 KCTD14Q9BQ13 255 aaPredicted RBP21.64■■□□□ 1.05
HMGN1-217ENST00000489072 NSRP1Q9H0G5 558 aaKnown RBP21.64■■□□□ 1.05
HMGN1-217ENST00000489072 INIPQ9NRY2 104 aa21.64■■□□□ 1.05
HMGN1-217ENST00000489072 RTTNQ86VV8 2226 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 A0A1W2PRG6 482 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 GMNCA6NCL1 334 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 DHHO43323 396 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 PDE5AO76074 875 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 LY6HO94772 140 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 IGHG1P01857 330 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 QDPRP09417 244 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 BMP4P12644 408 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 THBS4P35443 961 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 LAPTM4AQ15012 233 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 HIST3H3Q16695 136 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 IFI44LQ53G44 452 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 PIWIL3Q7Z3Z3 882 aaKnown RBP21.63■■□□□ 1.05
HMGN1-217ENST00000489072 CPLX4Q7Z7G2 160 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 ZNF347Q96SE7 839 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 SEPHS2Q99611 448 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 RHNO1Q9BSD3 238 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 MRPL13Q9BYD1 178 aaKnown RBP21.63■■□□□ 1.05
HMGN1-217ENST00000489072 TMEM38BQ9NVV0 291 aa21.63■■□□□ 1.05
HMGN1-217ENST00000489072 CHD3Q12873 2000 aaKnown RBP21.62■■□□□ 1.05
HMGN1-217ENST00000489072 YLPM1P49750 1951 aaKnown RBP21.62■■□□□ 1.05
HMGN1-217ENST00000489072 A0A096LNT2 108 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 B9A039 149 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 MCIDASD6RGH6 385 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 NDUFAB1O14561 156 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 PRSS23O95084 383 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 PATE4P0C8F1 98 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 IFI30P13284 250 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 GIPRP48546 466 aa21.62■■□□□ 1.05
HMGN1-217ENST00000489072 PTDSS1P48651 473 aaKnown RBP21.62■■□□□ 1.05
HMGN1-217ENST00000489072 EFNA4P52798 201 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms