RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 SLC38A2Q96QD8 506 aa13.19□□□□□ -0.3
CYTH3-209ENST00000488964 FOXB1Q99853 325 aa13.19□□□□□ -0.3
CYTH3-209ENST00000488964 KATNB1Q9BVA0 655 aa13.19□□□□□ -0.3
CYTH3-209ENST00000488964 C1orf21Q9H246 121 aa13.19□□□□□ -0.3
CYTH3-209ENST00000488964 DENND2DQ9H6A0 471 aaPredicted RBP13.19□□□□□ -0.3
CYTH3-209ENST00000488964 NDUFAF4Q9P032 175 aa13.19□□□□□ -0.3
CYTH3-209ENST00000488964 ACTR3BQ9P1U1 418 aa13.19□□□□□ -0.3
CYTH3-209ENST00000488964 HIF3AQ9Y2N7 669 aa13.19□□□□□ -0.3
CYTH3-209ENST00000488964 ATP23Q9Y6H3 246 aa13.19□□□□□ -0.3
CYTH3-209ENST00000488964 PRRC2AP48634 2157 aaKnown RBP13.19□□□□□ -0.3
CYTH3-209ENST00000488964 RAI1Q7Z5J4 1906 aaPredicted RBP13.18□□□□□ -0.3
CYTH3-209ENST00000488964 A6NIZ1 184 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 hCG_2039718K7EN88 272 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 FFAR1O14842 300 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 MGRN1O60291 552 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 PIP5K1CO60331 668 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 RPL4P36578 427 aaKnown RBP13.18□□□□□ -0.3
CYTH3-209ENST00000488964 GUCA1AP43080 201 aaPredicted RBP13.18□□□□□ -0.3
CYTH3-209ENST00000488964 RAP1BP61224 184 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 RAP1AP62834 184 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 NKX6-1P78426 367 aaPredicted RBP13.18□□□□□ -0.3
CYTH3-209ENST00000488964 DNAL1Q4LDG9 190 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 LINGO2Q7L985 606 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 PIWIL3Q7Z3Z3 882 aaKnown RBP13.18□□□□□ -0.3
CYTH3-209ENST00000488964 DPPA2Q7Z7J5 298 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 LURAP1LQ8IV03 231 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 NOXO1Q8NFA2 376 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 IL17RDQ8NFM7 739 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 TMEM54Q969K7 222 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 GSX2Q9BZM3 304 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 KCNN2Q9H2S1 579 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 TXNIPQ9H3M7 391 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 MAN2C1Q9NTJ4 1040 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 TMCC3Q9ULS5 477 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 LAMP3Q9UQV4 416 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 CSMD2Q7Z408 3487 aa13.18□□□□□ -0.3
CYTH3-209ENST00000488964 HRNRQ86YZ3 2850 aaPredicted RBP13.17□□□□□ -0.3
CYTH3-209ENST00000488964 A0A087WUU8 490 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 SHISA9B4DS77 424 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 UBL3O95164 117 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 GADD45GO95257 159 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 RAB36O95755 333 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 PGA4P0DJD7 388 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 PGA3P0DJD8 388 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 CD79AP11912 226 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 CBR1P16152 277 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 ACADSP16219 412 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 TOP3AQ13472 1001 aaPredicted RBP13.17□□□□□ -0.3
CYTH3-209ENST00000488964 GSG1Q2KHT4 349 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 ZNF544Q6NX49 715 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 PODNL1Q6PEZ8 512 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 DHFR2Q86XF0 187 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 OR4F15Q8NGB8 312 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 OR51A7Q8NH64 312 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 ASB10Q8WXI3 467 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 PERPQ96FX8 193 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 DHRS9Q9BPW9 319 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 USF3Q68DE3 2245 aa13.17□□□□□ -0.3
CYTH3-209ENST00000488964 XKRYO14609 159 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 DHHO43323 396 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 PRSS23O95084 383 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 QDPRP09417 244 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 OR8G3PP0DMU2 310 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 B4GALT1P15291 398 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 HOXB6P17509 224 aaKnown RBP13.16□□□□□ -0.3
CYTH3-209ENST00000488964 MSX2P35548 267 aaPredicted RBP13.16□□□□□ -0.3
CYTH3-209ENST00000488964 GPR4P46093 362 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 PTH2RP49190 550 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 FABP6P51161 128 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 CTXN1P60606 82 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 RPL27P61353 136 aaKnown RBP13.16□□□□□ -0.3
CYTH3-209ENST00000488964 VLDLRP98155 873 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 CHRNB3Q05901 458 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 CD47Q08722 323 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 NPRL3Q12980 569 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 TRIM25Q14258 630 aaKnown RBP13.16□□□□□ -0.3
CYTH3-209ENST00000488964 ETFDHQ16134 617 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 NRN1LQ496H8 165 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 PRSS57Q6UWY2 283 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 NHLRC1Q6VVB1 395 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 TMPRSS11FQ6ZWK6 438 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 ZNF627Q7L945 461 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 TGIF2LYQ8IUE0 185 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 ZDHHC21Q8IVQ6 265 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 MOSPD2Q8NHP6 518 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 SLC7A13Q8TCU3 470 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 C7orf34Q96L11 122 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 RBP7Q96R05 134 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 ALG12Q9BV10 488 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 SMURF2Q9HAU4 748 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 IL1RAPQ9NPH3 570 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 CRNNQ9UBG3 495 aaPredicted RBP13.16□□□□□ -0.3
CYTH3-209ENST00000488964 GRHPRQ9UBQ7 328 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 FBXO9Q9UK97 447 aaPredicted RBP13.16□□□□□ -0.3
CYTH3-209ENST00000488964 SPEF1Q9Y4P9 236 aa13.16□□□□□ -0.3
CYTH3-209ENST00000488964 MED13LQ71F56 2210 aa13.15□□□□□ -0.3
CYTH3-209ENST00000488964 TRAV27A0A087WT01 109 aa13.15□□□□□ -0.3
CYTH3-209ENST00000488964 IGHV1-18A0A0C4DH31 117 aa13.15□□□□□ -0.3
CYTH3-209ENST00000488964 GYG2O15488 501 aa13.15□□□□□ -0.3
CYTH3-209ENST00000488964 TRMUO75648 421 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms