RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 DNAL1Q4LDG9 190 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 ZNF627Q7L945 461 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 ZDHHC21Q8IVQ6 265 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
COL1A1-207ENST00000486572 NOXO1Q8NFA2 376 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 OR4K5Q8NGD3 323 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 OR52J3Q8NH60 311 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 OR51A7Q8NH64 312 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 PIGTQ969N2 578 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 FBXW5Q969U6 566 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 CCDC124Q96CT7 223 aaKnown RBP15.9■□□□□ 0.14
COL1A1-207ENST00000486572 FAM46AQ96IP4 442 aaKnown RBP15.9■□□□□ 0.14
COL1A1-207ENST00000486572 CLPTM1LQ96KA5 538 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 ZNF347Q96SE7 839 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 THTPAQ9BU02 230 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 CXXC4Q9H2H0 198 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 KRCC1Q9NPI7 259 aaPredicted RBP15.9■□□□□ 0.14
COL1A1-207ENST00000486572 BEX4Q9NWD9 120 aaPredicted RBP15.9■□□□□ 0.14
COL1A1-207ENST00000486572 STX18Q9P2W9 335 aaKnown RBP15.9■□□□□ 0.14
COL1A1-207ENST00000486572 POFUT2Q9Y2G5 429 aa15.9■□□□□ 0.14
COL1A1-207ENST00000486572 TCRBV5S2A0A599 114 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 CENPBD1B2RD01 187 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 CDC42EP2O14613 210 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 GYG2O15488 501 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 GADD45GO95257 159 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 CDH11P55287 796 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 TUBA1BP68363 451 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 TUBA4AP68366 448 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 MS4A2Q01362 244 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 SPOCK1Q08629 439 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 FHL1Q13642 323 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 SEC23BQ15437 767 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 TAF11Q15544 211 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 ARMC4Q5T2S8 1044 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 SLC22A25Q6T423 547 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 TUBA1AQ71U36 451 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 CCDC36Q8IYA8 594 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 NEUROG1Q92886 237 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 POP5Q969H6 163 aaKnown RBP15.89■□□□□ 0.13
COL1A1-207ENST00000486572 SEPHS2Q99611 448 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 FOXB1Q99853 325 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 FUZQ9BT04 418 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 TXNIPQ9H3M7 391 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 ROS1P08922 2347 aa15.89■□□□□ 0.13
COL1A1-207ENST00000486572 STAMBPO95630 424 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 IGHMP01871 453 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 B4GALT1P15291 398 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 ACADSP16219 412 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 RRM2P31350 389 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 OMPP47874 163 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 LIMS1P48059 325 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 RUNX1T1Q06455 604 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 TOP3AQ13472 1001 aaPredicted RBP15.88■□□□□ 0.13
COL1A1-207ENST00000486572 HIST3H3Q16695 136 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 ZBED5Q49AG3 693 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 LRFN4Q6PJG9 635 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 SPNS3Q6ZMD2 512 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 ZNF813Q6ZN06 617 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 PIWIL3Q7Z3Z3 882 aaKnown RBP15.88■□□□□ 0.13
COL1A1-207ENST00000486572 DEPDC4Q8N2C3 294 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 FAM169BQ8N8A8 192 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 LRRC75AQ8NAA5 344 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 SLC38A2Q96QD8 506 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 TNFRSF13CQ96RJ3 184 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 MRPL13Q9BYD1 178 aaKnown RBP15.88■□□□□ 0.13
COL1A1-207ENST00000486572 NDEL1Q9GZM8 345 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 MAGIXQ9H6Y5 334 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 CRNNQ9UBG3 495 aaPredicted RBP15.88■□□□□ 0.13
COL1A1-207ENST00000486572 POU2F3Q9UKI9 436 aa15.88■□□□□ 0.13
COL1A1-207ENST00000486572 ALPK2Q86TB3 2170 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 IGHV1-18A0A0C4DH31 117 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 SH3PXD2BA1X283 911 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 DHHO43323 396 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 TRMUO75648 421 aaKnown RBP15.87■□□□□ 0.13
COL1A1-207ENST00000486572 QDPRP09417 244 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 MAGEA2P43356 314 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 CAPZA2P47755 286 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 CTXN1P60606 82 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 RPL27P61353 136 aaKnown RBP15.87■□□□□ 0.13
COL1A1-207ENST00000486572 C3orf36Q3SXR2 165 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 FAM205BPQ63HN1 556 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 IGFN1Q86VF2 1251 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 SYT14Q8NB59 555 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 IGFBPL1Q8WX77 278 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 SLC7A6OSQ96CW6 309 aaPredicted RBP15.87■□□□□ 0.13
COL1A1-207ENST00000486572 LRGUKQ96M69 825 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 CISD1Q9NZ45 108 aaKnown RBP15.87■□□□□ 0.13
COL1A1-207ENST00000486572 AURKCQ9UQB9 309 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 CADP27708 2225 aa15.87■□□□□ 0.13
COL1A1-207ENST00000486572 ZNF503-AS2A6NEH8 195 aa15.86■□□□□ 0.13
COL1A1-207ENST00000486572 ACOT8O14734 319 aa15.86■□□□□ 0.13
COL1A1-207ENST00000486572 SMPD2O60906 423 aa15.86■□□□□ 0.13
COL1A1-207ENST00000486572 TMCC2O75069 709 aa15.86■□□□□ 0.13
COL1A1-207ENST00000486572 ENTPD5O75356 428 aa15.86■□□□□ 0.13
COL1A1-207ENST00000486572 IGKV3-15P01624 115 aa15.86■□□□□ 0.13
COL1A1-207ENST00000486572 IGLV1-44P01699 117 aa15.86■□□□□ 0.13
COL1A1-207ENST00000486572 NR2C1P13056 603 aa15.86■□□□□ 0.13
COL1A1-207ENST00000486572 CBR1P16152 277 aa15.86■□□□□ 0.13
COL1A1-207ENST00000486572 RPL4P36578 427 aaKnown RBP15.86■□□□□ 0.13
COL1A1-207ENST00000486572 TRAP1Q12931 704 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms