RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ZNF442Q9H7R0 627 aa15.96■□□□□ 0.15
PRPF40A-209ENST00000486100 EFCAB1Q9HAE3 211 aa15.96■□□□□ 0.15
PRPF40A-209ENST00000486100 HEATR1Q9H583 2144 aaKnown RBP15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 OR7A10O76100 309 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 B4GALT1P15291 398 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 LIPEQ05469 1076 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 PIGFQ07326 219 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 MELKQ14680 651 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 ZNF525Q8N782 197 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 NANOS1Q8WY41 292 aaKnown RBP15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 FAM168AQ92567 244 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 ZNF75AQ96N20 296 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 PLK3Q9H4B4 646 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 C20orf141Q9NUB4 165 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 ZNF224Q9NZL3 707 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 MED31Q9Y3C7 131 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 ZANQ9Y493 2812 aa15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 FN1P02751 2386 aaKnown RBP15.95■□□□□ 0.14
PRPF40A-209ENST00000486100 ALPK2Q86TB3 2170 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 NSD1Q96L73 2696 aaPredicted RBP15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 TP53P04637 393 aaPredicted RBP15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 CSF3P09919 207 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 PGA4P0DJD7 388 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 PGA3P0DJD8 388 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 SLC25A16P16260 332 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 IFNA8P32881 189 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 THBS4P35443 961 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 RAB1AP62820 205 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 RPL18Q07020 188 aaKnown RBP15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 ST3GAL3Q11203 375 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 C8orf82Q6P1X6 216 aaPredicted RBP15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 TREML1Q86YW5 311 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 NOX3Q9HBY0 568 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 GMPR2Q9P2T1 348 aaKnown RBP15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 FBXO9Q9UK97 447 aaPredicted RBP15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 A4GNTQ9UNA3 340 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 HIVEP2P31629 2446 aa15.94■□□□□ 0.14
PRPF40A-209ENST00000486100 A0A096LNT2 108 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 A0A1W2PRG6 482 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 HTR3EA5X5Y0 456 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 DHHO43323 396 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 ENTPD5O75356 428 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 UBL3O95164 117 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 IGHG1P01857 330 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 F13BP05160 661 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 QDPRP09417 244 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 TSPAN19P0C672 248 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 ZNF14P17017 642 aaPredicted RBP15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 NPR2P20594 1047 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 AQP2P41181 271 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 PTDSS1P48651 473 aaKnown RBP15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 SLC7A2P52569 658 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 DAG1Q14118 895 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 HIST3H3Q16695 136 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 HACD2Q6Y1H2 254 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 SPATA21Q7Z572 469 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 SKA3Q8IX90 412 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 SLC22A24Q8N4F4 322 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 C10orf105Q8TEF2 133 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 MS4A3Q96HJ5 214 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 PRRC1Q96M27 445 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 SORCS2Q96PQ0 1159 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 VRK1Q99986 396 aaPredicted RBP15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 ELAC2Q9BQ52 826 aaKnown RBP15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 MRPL13Q9BYD1 178 aaKnown RBP15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 INIPQ9NRY2 104 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 FKBP7Q9Y680 259 aa15.93■□□□□ 0.14
PRPF40A-209ENST00000486100 NAV3Q8IVL0 2385 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 CENPBD1B2RD01 187 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 CXCR6O00574 342 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 NME4O00746 187 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 NDUFAB1O14561 156 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 TLX2O43763 284 aaPredicted RBP15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 CD5LO43866 347 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 GPRIN2O60269 458 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 LY6HO94772 140 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 RAB36O95755 333 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 OR8G3PP0DMU2 310 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 ZNF35P13682 527 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 NR4A1P22736 598 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 GIPRP48546 466 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 RUNX1T1Q06455 604 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 LOXL1Q08397 574 aaPredicted RBP15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 CBLL1Q75N03 491 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 VTCN1Q7Z7D3 282 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 MCHR2Q969V1 340 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 TNFRSF13CQ96RJ3 184 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 DOK1Q99704 481 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 TMEM38BQ9NVV0 291 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 FBXL3Q9UKT7 428 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 SPEF1Q9Y4P9 236 aa15.92■□□□□ 0.14
PRPF40A-209ENST00000486100 TMEM129A0AVI4 362 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 MCIDASD6RGH6 385 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 hCG_2039718K7EN88 272 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 GSTA4O15217 222 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 IFNW1P05000 195 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 PATE4P0C8F1 98 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 YAP1P46937 504 aaKnown RBP15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 GSK3BP49841 420 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 PPOXP50336 477 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms