RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	OAF	Q86UD1	273 aa		13.13	□□□□□ -0.31
NR1H3-222	ENST00000483882	IGFN1	Q86VF2	1251 aa		13.13	□□□□□ -0.31
NR1H3-222	ENST00000483882	UEVLD	Q8IX04	471 aa		13.13	□□□□□ -0.31
NR1H3-222	ENST00000483882	CDK20	Q8IZL9	346 aa		13.13	□□□□□ -0.31
NR1H3-222	ENST00000483882	OR10G2	Q8NGC3	310 aa		13.13	□□□□□ -0.31
NR1H3-222	ENST00000483882	GNPDA2	Q8TDQ7	276 aa		13.13	□□□□□ -0.31
NR1H3-222	ENST00000483882	HIST1H2AC	Q93077	130 aa		13.13	□□□□□ -0.31
NR1H3-222	ENST00000483882	PKP2	Q99959	881 aa		13.13	□□□□□ -0.31
NR1H3-222	ENST00000483882	EMC6	Q9BV81	110 aa		13.13	□□□□□ -0.31
NR1H3-222	ENST00000483882	EMC3	Q9P0I2	261 aa		13.13	□□□□□ -0.31
NR1H3-222	ENST00000483882	NOX1	Q9Y5S8	564 aa		13.13	□□□□□ -0.31
NR1H3-222	ENST00000483882	UNC119B	A6NIH7	251 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	GNGT2	O14610	69 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	RNF13	O43567	381 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	DEAF1	O75398	565 aa	Predicted RBP	13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	SERPINI2	O75830	405 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	OR6A2	O95222	327 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	IGHV3-9	P01782	118 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	TP53	P04637	393 aa	Predicted RBP	13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	IFNGR1	P15260	489 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	FAS	P25445	335 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	RUNX1T1	Q06455	604 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	TSPAN31	Q12999	210 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	C1D	Q13901	141 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	PHYHD1	Q5SRE7	291 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	TSPO2	Q5TGU0	170 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	C20orf204	Q6ZNR8	217 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	C22orf34	Q6ZV56	151 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	LINGO2	Q7L985	606 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	TMEM123	Q8N131	208 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	GABRG1	Q8N1C3	465 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	CIART	Q8N365	385 aa	Predicted RBP	13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	AQP11	Q8NBQ7	271 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	GIPC3	Q8TF64	312 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	COX4I2	Q96KJ9	171 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	OR2M2	Q96R28	347 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	FEV	Q99581	238 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	NIPSNAP1	Q9BPW8	284 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	SLC7A10	Q9NS82	523 aa		13.12	□□□□□ -0.31
NR1H3-222	ENST00000483882	SLC35F4	A4IF30	521 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	ARRDC5	A6NEK1	342 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	MCIDAS	D6RGH6	385 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	MRPL33	O75394	65 aa	Known RBP	13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	BAG2	O95816	211 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	IGFBP1	P08833	259 aa	Predicted RBP	13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	IL1RL1	Q01638	556 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	GK3P	Q14409	553 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	MELK	Q14680	651 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	ALG10	Q5BKT4	473 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	NIPAL3	Q6P499	406 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	CASP12	Q6UXS9	341 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	SLC35D2	Q76EJ3	337 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	LINC00471	Q8N535	108 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	ANKK1	Q8NFD2	765 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	APH1A	Q96BI3	265 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	BDH2	Q9BUT1	245 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	DGCR6L	Q9BY27	220 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	SEMA6A	Q9H2E6	1030 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	INIP	Q9NRY2	104 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	PDP1	Q9P0J1	537 aa	Predicted RBP	13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	IL20RA	Q9UHF4	553 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	RCE1	Q9Y256	329 aa		13.11	□□□□□ -0.31
NR1H3-222	ENST00000483882	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	TRIM64	A6NGJ6	449 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	TRIM64B	A6NI03	449 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	PDLIM1	O00151	329 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	E2F6	O75461	281 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	UPK3A	O75631	287 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	LOX	P28300	417 aa	Predicted RBP	13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	IFNGR2	P38484	337 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	BID	P55957	195 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	CTXN1	P60606	82 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	ANKDD1A	Q495B1	522 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	BEX5	Q5H9J7	111 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	ARMC4	Q5T2S8	1044 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	SHQ1	Q6PI26	577 aa	Known RBP	13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	PRSS57	Q6UWY2	283 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	ZNF620	Q6ZNG0	422 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	ZNF100	Q8IYN0	542 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	PQLC1	Q8N2U9	271 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	OR8D4	Q8NGM9	314 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	OR5K1	Q8NHB7	308 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	NRG4	Q8WWG1	115 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	ASB10	Q8WXI3	467 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	GTPBP3	Q969Y2	492 aa	Known RBP	13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	NRBF2	Q96F24	287 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	CENPN	Q96H22	339 aa	Predicted RBP	13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	TSPAN32	Q96QS1	320 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	EGLN3	Q9H6Z9	239 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	ZNF346	Q9UL40	294 aa	Known RBP	13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	MGAT4B	Q9UQ53	548 aa		13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	NIPBL	Q6KC79	2804 aa	eCLIP	13.1	□□□□□ -0.31
NR1H3-222	ENST00000483882	CASQ2	O14958	399 aa	Predicted RBP	13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	NDUFB2	O95178	105 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	ADA	P00813	363 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	IGHM	P01871	453 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	THBD	P07204	575 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	FCGR1A	P12314	374 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	PPP3CB	P16298	524 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	IGHV1-2	P23083	117 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms