RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 RHCGQ9UBD6 479 aa13.19□□□□□ -0.3
COL16A1-213ENST00000482910 TMEM5Q9Y2B1 443 aa13.19□□□□□ -0.3
COL16A1-213ENST00000482910 POFUT2Q9Y2G5 429 aa13.19□□□□□ -0.3
COL16A1-213ENST00000482910 A0A096LPE4 126 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 A0A1W2PPZ6 126 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 OVOL3O00110 214 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 PIP5K1CO60331 668 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 CBR1P16152 277 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 MAKP20794 623 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 ZNF133P52736 654 aaPredicted RBP13.18□□□□□ -0.3
COL16A1-213ENST00000482910 NKX6-1P78426 367 aaPredicted RBP13.18□□□□□ -0.3
COL16A1-213ENST00000482910 VLDLRP98155 873 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 HIST3H3Q16695 136 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 PGGHGQ32M88 737 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 IQCCQ4KMZ1 466 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 MTX3Q5HYI7 312 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 TMPRSS11FQ6ZWK6 438 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 RRM2BQ7LG56 351 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 KRTAP1-3Q8IUG1 177 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 FAM86B1Q8N7N1 296 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 SLC7A13Q8TCU3 470 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 ASB10Q8WXI3 467 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 FOXB1Q99853 325 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 C1QTNF6Q9BXI9 259 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 MRPL13Q9BYD1 178 aaKnown RBP13.18□□□□□ -0.3
COL16A1-213ENST00000482910 C1orf21Q9H246 121 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 TXNIPQ9H3M7 391 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 DENND2DQ9H6A0 471 aaPredicted RBP13.18□□□□□ -0.3
COL16A1-213ENST00000482910 ACTR3BQ9P1U1 418 aa13.18□□□□□ -0.3
COL16A1-213ENST00000482910 IGHV1-18A0A0C4DH31 117 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 EFCAB9A8MZ26 197 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 MCIDASD6RGH6 385 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 MGRN1O60291 552 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 IGHMP01871 453 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 F13BP05160 661 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 SOD3P08294 240 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 T-ENOLP0DO92 83 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 SAGP10523 405 aaPredicted RBP13.17□□□□□ -0.3
COL16A1-213ENST00000482910 NR2C1P13056 603 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 ACADSP16219 412 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 ARR3P36575 388 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 PTH2RP49190 550 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 SMIM11AP58511 58 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL16A1-213ENST00000482910 SPOCK1Q08629 439 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 FOXD4Q12950 439 aaPredicted RBP13.17□□□□□ -0.3
COL16A1-213ENST00000482910 MELKQ14680 651 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 NRN1LQ496H8 165 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 ALG10Q5BKT4 473 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 ARMC4Q5T2S8 1044 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 FAM205BPQ63HN1 556 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 ZNF544Q6NX49 715 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 LRFN4Q6PJG9 635 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 ZNF813Q6ZN06 617 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 PIWIL3Q7Z3Z3 882 aaKnown RBP13.17□□□□□ -0.3
COL16A1-213ENST00000482910 OAFQ86UD1 273 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 NOXO1Q8NFA2 376 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 MOSPD2Q8NHP6 518 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 BCAS4Q8TDM0 211 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 NANOS1Q8WY41 292 aaKnown RBP13.17□□□□□ -0.3
COL16A1-213ENST00000482910 POP5Q969H6 163 aaKnown RBP13.17□□□□□ -0.3
COL16A1-213ENST00000482910 MCUR1Q96AQ8 359 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 DHRS9Q9BPW9 319 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 TRAF4Q9BUZ4 470 aaPredicted RBP13.17□□□□□ -0.3
COL16A1-213ENST00000482910 TMUB1Q9BVT8 246 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 POU2F3Q9UKI9 436 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 PRPF19Q9UMS4 504 aaKnown RBP13.17□□□□□ -0.3
COL16A1-213ENST00000482910 LAMP3Q9UQV4 416 aa13.17□□□□□ -0.3
COL16A1-213ENST00000482910 E7EQL1 145 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 DHHO43323 396 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 TRMUO75648 421 aaKnown RBP13.16□□□□□ -0.3
COL16A1-213ENST00000482910 TTKP33981 857 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 MSX2P35548 267 aaPredicted RBP13.16□□□□□ -0.3
COL16A1-213ENST00000482910 CLRN1P58418 232 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 FHL1Q13642 323 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 LAPTM4AQ15012 233 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 AGAP6Q5VW22 663 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 PODNL1Q6PEZ8 512 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 TRPM8Q7Z2W7 1104 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 LRRC75AQ8NAA5 344 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 IL17RDQ8NFM7 739 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 FNDC8Q8TC99 324 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 KCNS3Q9BQ31 491 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 FUZQ9BT04 418 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 SMURF2Q9HAU4 748 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 IL1RAPQ9NPH3 570 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 KRCC1Q9NPI7 259 aaPredicted RBP13.16□□□□□ -0.3
COL16A1-213ENST00000482910 B3GNT2Q9NY97 397 aa13.16□□□□□ -0.3
COL16A1-213ENST00000482910 MAP1AP78559 2803 aaPredicted RBP13.15□□□□□ -0.3
COL16A1-213ENST00000482910 hCG_2039718K7EN88 272 aa13.15□□□□□ -0.3
COL16A1-213ENST00000482910 CRYAAP02489 173 aa13.15□□□□□ -0.3
COL16A1-213ENST00000482910 QDPRP09417 244 aa13.15□□□□□ -0.3
COL16A1-213ENST00000482910 CECR9P0C854 216 aa13.15□□□□□ -0.3
COL16A1-213ENST00000482910 LIMS1P48059 325 aa13.15□□□□□ -0.3
COL16A1-213ENST00000482910 RPL27P61353 136 aaKnown RBP13.15□□□□□ -0.3
COL16A1-213ENST00000482910 TUBA1BP68363 451 aa13.15□□□□□ -0.3
COL16A1-213ENST00000482910 TUBA4AP68366 448 aa13.15□□□□□ -0.3
COL16A1-213ENST00000482910 NAAAQ02083 359 aa13.15□□□□□ -0.3
COL16A1-213ENST00000482910 RUNX1T1Q06455 604 aa13.15□□□□□ -0.3
COL16A1-213ENST00000482910 FGD3Q5JSP0 725 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms