RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 WARS2Q9UGM6 360 aaKnown RBP2.39□□□□□ -2.03
COPA-204ENST00000481522 BTNL2Q9UIR0 455 aa2.39□□□□□ -2.03
COPA-204ENST00000481522 MFHAS1Q9Y4C4 1052 aa2.39□□□□□ -2.03
COPA-204ENST00000481522 ALG6Q9Y672 507 aa2.39□□□□□ -2.03
COPA-204ENST00000481522 MAD1L1Q9Y6D9 718 aa2.39□□□□□ -2.03
COPA-204ENST00000481522 CDH10Q9Y6N8 788 aa2.39□□□□□ -2.03
COPA-204ENST00000481522 ARID1AO14497 2285 aa2.39□□□□□ -2.03
COPA-204ENST00000481522 PDCD11Q14690 1871 aaKnown RBP2.39□□□□□ -2.03
COPA-204ENST00000481522 HUWE1Q7Z6Z7 4374 aaKnown RBP2.39□□□□□ -2.03
COPA-204ENST00000481522 ASTN1O14525 1302 aa2.39□□□□□ -2.03
COPA-204ENST00000481522 ADGRA3Q8IWK6 1321 aa2.39□□□□□ -2.03
COPA-204ENST00000481522 LOXHD1Q8IVV2 1947 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
COPA-204ENST00000481522 HELTA6NFD8 242 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 ECI2O75521 394 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 B3GAT3O94766 335 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 SUPT7LO94864 414 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 SLITRK3O94933 977 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 MFN2O95140 757 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 AK1P00568 194 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 HOXC4P09017 264 aaPredicted RBP2.38□□□□□ -2.03
COPA-204ENST00000481522 COX6B1P14854 86 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 PGCP20142 388 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 TBXA2RP21731 343 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 CD1BP29016 333 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 IRX3P78415 501 aaPredicted RBP2.38□□□□□ -2.03
COPA-204ENST00000481522 FAM220AQ7Z4H9 259 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 VRK2Q86Y07 508 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 DCAF4L2Q8NA75 395 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 HTR3CQ8WXA8 447 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 SLC35E1Q96K37 410 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 ZNF416Q9BWM5 594 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 NAT10Q9H0A0 1025 aaKnown RBP2.38□□□□□ -2.03
COPA-204ENST00000481522 MAGT1Q9H0U3 335 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 POLE3Q9NRF9 147 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 TAS2R3Q9NYW6 316 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 GSTK1Q9Y2Q3 226 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 KIF3AQ9Y496 699 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 PTPRDP23468 1912 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 ATP8B3O60423 1300 aa2.38□□□□□ -2.03
COPA-204ENST00000481522 YLPM1P49750 1951 aaKnown RBP2.38□□□□□ -2.03
COPA-204ENST00000481522 WNK2Q9Y3S1 2297 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 USP27XA6NNY8 438 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 E7ESA3 106 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 G3V4G9 280 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 MAPK13O15264 365 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 MSH4O15457 936 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 SNAPINO95295 136 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 GNA14O95837 355 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 IGKV3-11P04433 115 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 ZNF17P17021 662 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 TPSB2P20231 275 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 BCKDHBP21953 392 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 HTR1EP28566 365 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 ACADVLP49748 655 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 NUP107P57740 925 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 HTD2P86397 168 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 EWSR1Q01844 656 aaKnown RBP eCLIP2.37□□□□□ -2.03
COPA-204ENST00000481522 CUL1Q13616 776 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 ARFRP1Q13795 201 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 TPSAB1Q15661 275 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 MPPED2Q15777 294 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 SYPL1Q16563 259 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 ZNF630Q2M218 657 aaPredicted RBP2.37□□□□□ -2.03
COPA-204ENST00000481522 CCDC57Q2TAC2 916 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 RABGAP1LQ5R372 815 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 ARMCX2Q7L311 632 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 ZNF573Q86YE8 665 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 FADS6Q8N9I5 356 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 DENND6BQ8NEG7 585 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 OR51G2Q8NGK0 314 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 OR52I1Q8NGK6 324 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 TCTEX1D2Q8WW35 142 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 ZNF578Q96N58 590 aaPredicted RBP2.37□□□□□ -2.03
COPA-204ENST00000481522 SLC6A7Q99884 636 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 CALHM2Q9HA72 323 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 LRTM1Q9HBL6 345 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 MCCC2Q9HCC0 563 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 AURKCQ9UQB9 309 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 SLCO1B1Q9Y6L6 691 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 MROH5Q6ZUA9 1318 aa2.37□□□□□ -2.03
COPA-204ENST00000481522 TNRC6AQ8NDV7 1962 aaKnown RBP2.36□□□□□ -2.03
COPA-204ENST00000481522 LRP2P98164 4655 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 IGHV2-70DA0A0C4DH43 119 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 A0A1W2PNV4 684 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 KRTAP4-16G5E9R7 235 aaPredicted RBP2.36□□□□□ -2.03
COPA-204ENST00000481522 KIF2AO00139 706 aaPredicted RBP2.36□□□□□ -2.03
COPA-204ENST00000481522 PRKYO43930 277 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 CA11O75493 328 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 DIRAS3O95661 229 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 CA1P00915 261 aaPredicted RBP2.36□□□□□ -2.03
COPA-204ENST00000481522 H2BFMP0C1H6 154 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 ZNF32P17041 273 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 CCNE1P24864 410 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 PRKXP51817 358 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 AP3M2P53677 418 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 PLA2G16P53816 162 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 APOC4P55056 127 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 CSNK1G2P78368 415 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 DMTNQ08495 405 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms