RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	DUS3L	Q96G46	650 aa	Known RBP	8.32	□□□□□ -1.08
SFI1-222	ENST00000478887	KCNK17	Q96T54	332 aa		8.32	□□□□□ -1.08
SFI1-222	ENST00000478887	NDEL1	Q9GZM8	345 aa		8.32	□□□□□ -1.08
SFI1-222	ENST00000478887	YY1AP1	Q9H869	796 aa		8.32	□□□□□ -1.08
SFI1-222	ENST00000478887	REEP1	Q9H902	201 aa		8.32	□□□□□ -1.08
SFI1-222	ENST00000478887	CRLF2	Q9HC73	371 aa		8.32	□□□□□ -1.08
SFI1-222	ENST00000478887	OBP2B	Q9NPH6	170 aa		8.32	□□□□□ -1.08
SFI1-222	ENST00000478887	B3GAT2	Q9NPZ5	323 aa		8.32	□□□□□ -1.08
SFI1-222	ENST00000478887	GLTP	Q9NZD2	209 aa		8.32	□□□□□ -1.08
SFI1-222	ENST00000478887	AMDHD2	Q9Y303	409 aa		8.32	□□□□□ -1.08
SFI1-222	ENST00000478887	SAMHD1	Q9Y3Z3	626 aa	Known RBP	8.32	□□□□□ -1.08
SFI1-222	ENST00000478887	SLC25A15	Q9Y619	301 aa		8.32	□□□□□ -1.08
SFI1-222	ENST00000478887	FBN2	P35556	2912 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	ARPC4-TTLL3	A0A0A6YYG9	625 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887		A0A1W2PPR1	153 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	ARRDC5	A6NEK1	342 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	TRMU	O75648	421 aa	Known RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	CCNB2	O95067	398 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	HOXB1	P14653	301 aa	Predicted RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	ACADS	P16219	412 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	HOXC12	P31275	282 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	ERF	P50548	548 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	ZNF133	P52736	654 aa	Predicted RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	NR1H2	P55055	460 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	KRTAP10-9	P60411	292 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	RPL27	P61353	136 aa	Known RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	PPP1R8	Q12972	351 aa	Known RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	TSPAN31	Q12999	210 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	TOP3A	Q13472	1001 aa	Predicted RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	CCNI	Q14094	377 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	SMARCD3	Q6STE5	483 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	THSD4	Q6ZMP0	1018 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	ZNF620	Q6ZNG0	422 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	YTHDF3	Q7Z739	585 aa	Known RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	IGFN1	Q86VF2	1251 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	OR52N5	Q8NH56	324 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	FANK1	Q8TC84	345 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	GNPDA2	Q8TDQ7	276 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	HDAC2	Q92769	488 aa	Known RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	BCL2L2	Q92843	193 aa	Predicted RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	MUCL1	Q96DR8	90 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	ZNF837	Q96EG3	531 aa	Predicted RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	LURAP1	Q96LR2	239 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	TSPAN32	Q96QS1	320 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	ALG12	Q9BV10	488 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	KATNB1	Q9BVA0	655 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	POLDIP3	Q9BY77	421 aa	Known RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	CLEC4M	Q9H2X3	399 aa	Predicted RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	NGB	Q9NPG2	151 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	NPAP1	Q9NZP6	1156 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887	ZNF346	Q9UL40	294 aa	Known RBP	8.31	□□□□□ -1.08
SFI1-222	ENST00000478887		U3KQV3	271 aa		8.31	□□□□□ -1.08
SFI1-222	ENST00000478887		A6NIZ1	184 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	CIB2	O75838	187 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	TXNDC12	O95881	172 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	NR2C1	P13056	603 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	APEH	P13798	732 aa	Known RBP	8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	CDH2	P19022	906 aa	Predicted RBP	8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	RPL4	P36578	427 aa	Known RBP	8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	IST1	P53990	364 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	CLRN1	P58418	232 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	RAP1B	P61224	184 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	RAP1A	P62834	184 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	ERVK-25	P63136	954 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	ARF1	P84077	181 aa	Known RBP	8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	MICA	Q29983	383 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	HIKESHI	Q53FT3	197 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	MEST	Q5EB52	335 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	NCMAP	Q5T1S8	102 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	C10orf128	Q5T292	105 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	GPR139	Q6DWJ6	353 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	LRFN4	Q6PJG9	635 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	KLHL24	Q6TFL4	600 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	DPY19L2P2	Q6ZN68	376 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	CDC20B	Q86Y33	519 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	ARIH2OS	Q8N7S6	290 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	OR10G2	Q8NGC3	310 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	FNDC8	Q8TC99	324 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	MCHR2	Q969V1	340 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	PIK3IP1	Q96FE7	263 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	HS3ST6	Q96QI5	342 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	FOXB1	Q99853	325 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	TMEM204	Q9BSN7	226 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	DGCR6L	Q9BY27	220 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	OR52D1	Q9H346	318 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	SMURF2	Q9HAU4	748 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	NRIP3	Q9NQ35	241 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	ARMC1	Q9NVT9	282 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	DNAJB9	Q9UBS3	223 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	ADAM18	Q9Y3Q7	739 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	MAGED1	Q9Y5V3	778 aa	Predicted RBP	8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	CDH10	Q9Y6N8	788 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	NBPF19	A0A087WUL8	3843 aa		8.3	□□□□□ -1.08
SFI1-222	ENST00000478887	FREM1	Q5H8C1	2179 aa		8.29	□□□□□ -1.08
SFI1-222	ENST00000478887	PKDREJ	Q9NTG1	2253 aa		8.29	□□□□□ -1.08
SFI1-222	ENST00000478887	SETX	Q7Z333	2677 aa	Known RBP	8.29	□□□□□ -1.08
SFI1-222	ENST00000478887		A0A096LPE4	126 aa		8.29	□□□□□ -1.08
SFI1-222	ENST00000478887	TEX13C	A0A0J9YWL9	993 aa		8.29	□□□□□ -1.08
SFI1-222	ENST00000478887		A0A1W2PPZ6	126 aa		8.29	□□□□□ -1.08

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms