RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 RPS4XP62701 263 aaKnown RBP13.59□□□□□ -0.23
HMGA1-206ENST00000478214 DGCR6Q14129 220 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 PGGHGQ32M88 737 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 ALG10Q5BKT4 473 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 LRFN4Q6PJG9 635 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 B3GLCTQ6Y288 498 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 ZNF813Q6ZN06 617 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 RRM2BQ7LG56 351 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 TRPM8Q7Z2W7 1104 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 OR13C2Q8NGS9 318 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 ASB10Q8WXI3 467 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 SLC38A2Q96QD8 506 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 TNFRSF13CQ96RJ3 184 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 TAS2R1Q9NYW7 299 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 ACTR3BQ9P1U1 418 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 POU2F3Q9UKI9 436 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 USF3Q68DE3 2245 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 TRBV4-1A0A0J9YWV2 114 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 CDC42EP2O14613 210 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 TRMUO75648 421 aaKnown RBP13.58□□□□□ -0.24
HMGA1-206ENST00000478214 PDE5AO76074 875 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 IGHG1P01857 330 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 B4GALT1P15291 398 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 ITGA2P17301 1181 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 CAPZA2P47755 286 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 DAP3P51398 398 aaKnown RBP13.58□□□□□ -0.24
HMGA1-206ENST00000478214 CLRN1P58418 232 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 ADAM8P78325 824 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 NKX6-1P78426 367 aaPredicted RBP13.58□□□□□ -0.24
HMGA1-206ENST00000478214 TOP3AQ13472 1001 aaPredicted RBP13.58□□□□□ -0.24
HMGA1-206ENST00000478214 FHL1Q13642 323 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 SEC23BQ15437 767 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 ARMC4Q5T2S8 1044 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 TMPRSS11FQ6ZWK6 438 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 ZNF627Q7L945 461 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 OAFQ86UD1 273 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 IGFN1Q86VF2 1251 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 KRTAP1-3Q8IUG1 177 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 CDK20Q8IZL9 346 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 ARHGAP24Q8N264 748 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 SYT14Q8NB59 555 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 WFDC11Q8NEX6 87 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 OR52J3Q8NH60 311 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 MCUR1Q96AQ8 359 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 PERPQ96FX8 193 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 FAM46AQ96IP4 442 aaKnown RBP13.58□□□□□ -0.24
HMGA1-206ENST00000478214 DHRS1Q96LJ7 313 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 ZNF347Q96SE7 839 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 FOXB1Q99853 325 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 MRPL13Q9BYD1 178 aaKnown RBP13.58□□□□□ -0.24
HMGA1-206ENST00000478214 TXNIPQ9H3M7 391 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 SEC61A2Q9H9S3 476 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 CRNNQ9UBG3 495 aaPredicted RBP13.58□□□□□ -0.24
HMGA1-206ENST00000478214 MOKQ9UQ07 419 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 ARID1AO14497 2285 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 PLCE1Q9P212 2302 aa13.58□□□□□ -0.24
HMGA1-206ENST00000478214 NPIPB13A6NJU9 1138 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 NPIPB4C9JG80 1138 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 ATP6V1G2-DDX39BF2Z307 99 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 DHHO43323 396 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 UBOX5O94941 541 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 IGLV1-44P01699 117 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 HLA-HP01893 362 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 FABP3P05413 133 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 CELA3BP08861 270 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 QDPRP09417 244 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 CBR1P16152 277 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 ACADSP16219 412 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 SLC9A3P48764 834 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 CTXN1P60606 82 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 MYBPC1Q00872 1141 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 MS4A2Q01362 244 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 HIST3H3Q16695 136 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 MDP1Q86V88 176 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 MYPOPQ86VE0 399 aaPredicted RBP13.57□□□□□ -0.24
HMGA1-206ENST00000478214 TGIF2LYQ8IUE0 185 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 CCDC36Q8IYA8 594 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 LRRC75A-AS1Q8N1F1 130 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 DEPDC4Q8N2C3 294 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 FAM169BQ8N8A8 192 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 LRRC75AQ8NAA5 344 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 NOXO1Q8NFA2 376 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 OR4K5Q8NGD3 323 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 CLPTM1LQ96KA5 538 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 SEPHS2Q99611 448 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 FUZQ9BT04 418 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 CXorf56Q9H5V9 222 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 NOX3Q9HBY0 568 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 B3GNT2Q9NY97 397 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 TMEM5Q9Y2B1 443 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 ATP23Q9Y6H3 246 aa13.57□□□□□ -0.24
HMGA1-206ENST00000478214 IGKV3-15P01624 115 aa13.56□□□□□ -0.24
HMGA1-206ENST00000478214 CD8AP01732 235 aa13.56□□□□□ -0.24
HMGA1-206ENST00000478214 CECR9P0C854 216 aa13.56□□□□□ -0.24
HMGA1-206ENST00000478214 CD79AP11912 226 aa13.56□□□□□ -0.24
HMGA1-206ENST00000478214 PAX7P23759 505 aa13.56□□□□□ -0.24
HMGA1-206ENST00000478214 LIMS1P48059 325 aa13.56□□□□□ -0.24
HMGA1-206ENST00000478214 PTH2RP49190 550 aa13.56□□□□□ -0.24
HMGA1-206ENST00000478214 IDH3GP51553 393 aaPredicted RBP13.56□□□□□ -0.24
HMGA1-206ENST00000478214 SPIBQ01892 262 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms