RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 MYPOPQ86VE0 399 aaPredicted RBP18.88■□□□□ 0.61
COL9A3-211ENST00000477612 ZNF566Q969W8 418 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 SEPHS2Q99611 448 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 CA10Q9NS85 328 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 ZNF224Q9NZL3 707 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 PMF1-BGLAPU3KQ54 211 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 GMNCA6NCL1 334 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 NPIPB13A6NJU9 1138 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 NPIPB4C9JG80 1138 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 BLOC1S5-TXNDC5H3BN57 136 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 SEC14L2O76054 403 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 BCL10O95999 233 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 IFNA8P32881 189 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 NUDT2P50583 147 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 HGFACQ04756 655 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 RAB35Q15286 201 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 LRFN4Q6PJG9 635 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 VTCN1Q7Z7D3 282 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 OFCC1Q8IZS5 231 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 OR10H5Q8NGA6 315 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 MRPL13Q9BYD1 178 aaKnown RBP18.87■□□□□ 0.61
COL9A3-211ENST00000477612 REG4Q9BYZ8 158 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 NSRP1Q9H0G5 558 aaKnown RBP18.87■□□□□ 0.61
COL9A3-211ENST00000477612 ZNF442Q9H7R0 627 aa18.87■□□□□ 0.61
COL9A3-211ENST00000477612 FN1P02751 2386 aaKnown RBP18.86■□□□□ 0.61
COL9A3-211ENST00000477612 NAV3Q8IVL0 2385 aa18.86■□□□□ 0.61
COL9A3-211ENST00000477612 SSX4O60224 188 aa18.86■□□□□ 0.61
COL9A3-211ENST00000477612 IFNW1P05000 195 aa18.86■□□□□ 0.61
COL9A3-211ENST00000477612 IDH3GP51553 393 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-211ENST00000477612 ZNF133P52736 654 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-211ENST00000477612 DSCR9P59020 149 aa18.86■□□□□ 0.61
COL9A3-211ENST00000477612 PSME3P61289 254 aa18.86■□□□□ 0.61
COL9A3-211ENST00000477612 MELKQ14680 651 aa18.86■□□□□ 0.61
COL9A3-211ENST00000477612 EFNB3Q15768 340 aa18.86■□□□□ 0.61
COL9A3-211ENST00000477612 ADIPOQQ15848 244 aa18.86■□□□□ 0.61
COL9A3-211ENST00000477612 GSG1Q2KHT4 349 aa18.86■□□□□ 0.61
COL9A3-211ENST00000477612 Q71RC1 249 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-211ENST00000477612 GEMIN6Q8WXD5 167 aaKnown RBP18.86■□□□□ 0.61
COL9A3-211ENST00000477612 SNX13Q9Y5W8 968 aa18.86■□□□□ 0.61
COL9A3-211ENST00000477612 ABCA1O95477 2261 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 IGHV2OR16-5A0A0B4J2B6 119 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 B9A039 149 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 RNF223E7ERA6 249 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 FFAR1O14842 300 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 PRSS23O95084 383 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 HLA-HP01893 362 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 B4GALT1P15291 398 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 ZNF14P17017 642 aaPredicted RBP18.85■□□□□ 0.61
COL9A3-211ENST00000477612 SERPINF1P36955 418 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 NRN1LQ496H8 165 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 IFI44LQ53G44 452 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 CPLX4Q7Z7G2 160 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 ASB10Q8WXI3 467 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 NANOS1Q8WY41 292 aaKnown RBP18.85■□□□□ 0.61
COL9A3-211ENST00000477612 NOX3Q9HBY0 568 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 INIPQ9NRY2 104 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 MAN2C1Q9NTJ4 1040 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 HIF3AQ9Y2N7 669 aa18.85■□□□□ 0.61
COL9A3-211ENST00000477612 A0A1W2PRG6 482 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 GSTA4O15217 222 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 DHHO43323 396 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 IGHG1P01857 330 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 F13BP05160 661 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 FUT4P22083 530 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 AQP2P41181 271 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 CAPZA2P47755 286 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 EFNA4P52798 201 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 NUDT6P53370 316 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 KRTAP1-1Q07627 177 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 ARMC4Q5T2S8 1044 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 HDDC2Q7Z4H3 204 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 SKA3Q8IX90 412 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 RNF113BQ8IZP6 322 aaKnown RBP18.84■□□□□ 0.61
COL9A3-211ENST00000477612 FBXO17Q96EF6 278 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 KCTD14Q9BQ13 255 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-211ENST00000477612 PLK3Q9H4B4 646 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 TMEM38BQ9NVV0 291 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 STX18Q9P2W9 335 aaKnown RBP18.84■□□□□ 0.61
COL9A3-211ENST00000477612 FBXO9Q9UK97 447 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-211ENST00000477612 FBXL3Q9UKT7 428 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 HIVEP2P31629 2446 aa18.84■□□□□ 0.61
COL9A3-211ENST00000477612 J3KTA2 159 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 MGRN1O60291 552 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 ENTPD5O75356 428 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 UBL3O95164 117 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 ZNF682O95780 498 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 F12P00748 615 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-211ENST00000477612 SERPINA1P01009 418 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 QDPRP09417 244 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 CD79AP11912 226 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 ZNF35P13682 527 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 ACADSP16219 412 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 DAP3P51398 398 aaKnown RBP18.83■□□□□ 0.6
COL9A3-211ENST00000477612 RAB1AP62820 205 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 LSM11P83369 360 aaKnown RBP eCLIP18.83■□□□□ 0.62e-10■■□□□ 11.6
COL9A3-211ENST00000477612 PRKCDQ05655 676 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 RUNX1T1Q06455 604 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 NPRL3Q12980 569 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 TRAM2Q15035 370 aa18.83■□□□□ 0.6
COL9A3-211ENST00000477612 TAF11Q15544 211 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms