RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CBR1P16152 277 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 SFTPDP35247 375 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 ZP1P60852 638 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 PLA2G7Q13093 441 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 C1orf61Q13536 156 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 NLRC3Q7RTR2 1065 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 OR5W2Q8NH69 310 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 RNF32Q9H0A6 362 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 ZNF331Q9NQX6 463 aaPredicted RBP10.67□□□□□ -0.7
U2AF1-209ENST00000475639 ASIC5Q9NY37 505 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 OARD1Q9Y530 152 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 ANKRD31Q8N7Z5 1873 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 BTBD17A6NE02 478 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 TXNDC12O95881 172 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 SULT1A3P0DMM9 295 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 SULT1A4P0DMN0 295 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 KCNE1P15382 129 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 ACKR3P25106 362 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 PTBP1P26599 531 aaKnown RBP eCLIP10.66□□□□□ -0.7
U2AF1-209ENST00000475639 TAS2R46P59540 309 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 KIAA1024LP59773 190 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 TBPL1P62380 186 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 DSC1Q08554 894 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 SLC35F2Q8IXU6 374 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 OR4Q3Q8NH05 313 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 HPSE2Q8WWQ2 592 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 RAB18Q9NP72 206 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 ZNF355PQ9NSJ1 428 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 H0Y8G0 127 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 SULT2B1O00204 365 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 ANXA7P20073 488 aaKnown RBP10.66□□□□□ -0.7
U2AF1-209ENST00000475639 GABRR1P24046 479 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 HLA-FP30511 346 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 SRPXP78539 464 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 CORO6Q6QEF8 472 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 BHLHA9Q7RTU4 235 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 TMEM200AQ86VY9 491 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 MIB2Q96AX9 1013 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 FGGYQ96C11 551 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 BPIFA2Q96DR5 249 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 CTSFQ9UBX1 484 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 PDCD11Q14690 1871 aaKnown RBP10.66□□□□□ -0.7
U2AF1-209ENST00000475639 CENPFP49454 3210 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 PRAMEF25A6NGN4 478 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 J3KTA2 159 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 YY2O15391 372 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 ZNF28P17035 718 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 CSNK1A1P48729 337 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 FAM180BQ6P0A1 224 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 DMBX1Q8NFW5 382 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 CD200R1Q8TD46 325 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 IER2Q9BTL4 223 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 SF3B6Q9Y3B4 125 aaKnown RBP10.66□□□□□ -0.7
U2AF1-209ENST00000475639 ABCA1O95477 2261 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 RLFQ13129 1914 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 GABRR3A8MPY1 467 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 SOCS6O14544 535 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 RAD1O60671 282 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 GCM2O75603 506 aaPredicted RBP10.66□□□□□ -0.7
U2AF1-209ENST00000475639 ZNF865P0CJ78 1059 aaPredicted RBP10.66□□□□□ -0.7
U2AF1-209ENST00000475639 ST3GAL2Q16842 350 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 ACTBL2Q562R1 376 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 WDR5BQ86VZ2 330 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 LRRC28Q86X40 367 aaPredicted RBP10.66□□□□□ -0.7
U2AF1-209ENST00000475639 KLHDC8AQ8IYD2 350 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 SYNPRQ8TBG9 265 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 CPNE4Q96A23 557 aaPredicted RBP10.66□□□□□ -0.7
U2AF1-209ENST00000475639 MRPL38Q96DV4 380 aaKnown RBP10.66□□□□□ -0.7
U2AF1-209ENST00000475639 FCRL1Q96LA6 429 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 DMRTA2Q96SC8 542 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 TMPRSS5Q9H3S3 457 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 ZNF768Q9H5H4 540 aaKnown RBP10.66□□□□□ -0.7
U2AF1-209ENST00000475639 APOBEC3BQ9UH17 382 aaKnown RBP10.66□□□□□ -0.7
U2AF1-209ENST00000475639 IER3IP1Q9Y5U9 82 aa10.66□□□□□ -0.7
U2AF1-209ENST00000475639 RTTNQ86VV8 2226 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 A0A0U1RQF3 1178 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 HIDE1A8MVS5 230 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 H3BML4 177 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 GPRIN2O60269 458 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 C1SP09871 688 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 OR10J4P0C629 311 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 OMGP23515 440 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 TACR3P29371 465 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 OTX2P32243 289 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 SELENOPP49908 381 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 RAB11AP62491 216 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 FABP5Q01469 135 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 ELAVL3Q14576 367 aaKnown RBP10.65□□□□□ -0.7
U2AF1-209ENST00000475639 ZNF266Q14584 549 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 PLK5Q496M5 336 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 BEX5Q5H9J7 111 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 FAM74A1Q5RGS3 127 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 AADACL3Q5VUY0 350 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 LIMS2Q7Z4I7 341 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 ZNF454Q8N9F8 522 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 OR2T27Q8NH04 317 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 PEX11GQ96HA9 241 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 AMDHD1Q96NU7 426 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 MAP3K3Q99759 626 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 NGBQ9NPG2 151 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms