RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 NMT2O60551 498 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 MBP02144 154 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 COX5AP20674 150 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 PTNP21246 168 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 PRKACBP22694 351 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 STOMP27105 288 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 OPRD1P41143 372 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 DAP3P51398 398 aaKnown RBP3.96□□□□□ -1.78
SMC5-203ENST00000475540 HSPA2P54652 639 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 RAB10P61026 200 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 TFDP3Q5H9I0 405 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 BEX5Q5H9J7 111 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 C19orf35Q6ZS72 473 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 FAM220AQ7Z4H9 259 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 MMAAQ8IVH4 418 aaKnown RBP3.96□□□□□ -1.78
SMC5-203ENST00000475540 ARIH2OSQ8N7S6 290 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 RHEBL1Q8TAI7 183 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 FAM110BQ8TC76 370 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 DTX3LQ8TDB6 740 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 OR1E3Q8WZA6 343 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 MYDGFQ969H8 173 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.96□□□□□ -1.78
SMC5-203ENST00000475540 ZNF707Q96C28 371 aaPredicted RBP3.96□□□□□ -1.78
SMC5-203ENST00000475540 C8orf44Q96CB5 159 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 MSANTD3Q96H12 275 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 MS4A14Q96JA4 679 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 PANX2Q96RD6 677 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 ZNF670Q9BS34 389 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 C8orf33Q9H7E9 229 aaPredicted RBP3.96□□□□□ -1.78
SMC5-203ENST00000475540 LYRM4Q9HD34 91 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 CCNB1IP1Q9NPC3 277 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 CYTL1Q9NRR1 136 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 AHSPQ9NZD4 102 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 PHF11Q9UIL8 331 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 ARID1AO14497 2285 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 A0A1W2PPV4 95 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 PP2D1A8MPX8 630 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 ZNF705EA8MWA4 302 aaPredicted RBP3.95□□□□□ -1.78
SMC5-203ENST00000475540 TRDCB7Z8K6 153 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 HSBP1L1C9JCN9 74 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 TGM6O95932 706 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 TUBG1P23258 451 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 FGF9P31371 208 aaPredicted RBP3.95□□□□□ -1.78
SMC5-203ENST00000475540 NUDT1P36639 197 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 HNRNPA3P51991 378 aaKnown RBP3.95□□□□□ -1.78
SMC5-203ENST00000475540 VGLL4Q14135 290 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 SYCP1Q15431 976 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 MRPL23Q16540 153 aaKnown RBP3.95□□□□□ -1.78
SMC5-203ENST00000475540 FAM83EQ2M2I3 478 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 C9orf135Q5VTT2 229 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 NUDCD3Q8IVD9 361 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 OR2L13Q8N349 312 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 SUMF2Q8NBJ7 301 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 B3GNT7Q8NFL0 401 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 OR52H1Q8NGJ2 320 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 OR4A4PQ8NGN8 299 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 HTR3CQ8WXA8 447 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 RNF126Q9BV68 326 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 NXF3Q9H4D5 531 aaKnown RBP3.95□□□□□ -1.78
SMC5-203ENST00000475540 MMP26Q9NRE1 261 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 TUBG2Q9NRH3 451 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 INPP5EQ9NRR6 644 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 MTCH1Q9NZJ7 389 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 BTNL2Q9UIR0 455 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 ERVW-1Q9UQF0 538 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 RHBDD3Q9Y3P4 386 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 ASTN1O14525 1302 aa3.95□□□□□ -1.78
SMC5-203ENST00000475540 TCRBV9S1A1TA0A576 114 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 A8MUA0 341 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 IDSB3KWA1 339 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 TEX46H3BTG2 121 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 K7ERQ8 282 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 POLR1CO15160 346 aaPredicted RBP3.94□□□□□ -1.78
SMC5-203ENST00000475540 CETN3O15182 167 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 PRKYO43930 277 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 SNAPINO95295 136 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 STAMBPO95630 424 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 LGALS2P05162 132 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 IGHV4-34P06331 123 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 MYL2P10916 166 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 ZNF43P17038 809 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 CTRLP40313 264 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 PPOXP50336 477 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 PRKXP51817 358 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 SCRN3Q0VDG4 424 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 PPIL2Q13356 520 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 ILKQ13418 452 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 CUL1Q13616 776 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 SASS6Q6UVJ0 657 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 UNQ9370/PRO34162Q6UXP9 181 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 ARCQ7LC44 396 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 NRMQ8IXM6 262 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 ZNF786Q8N393 782 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 ZNF740Q8NDX6 193 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 CATSPER1Q8NEC5 780 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 LKAAEAR1Q8TD35 194 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 RAB1CQ92928 201 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 CYP2S1Q96SQ9 504 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 RNF2Q99496 336 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 RACGAP1Q9H0H5 632 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms