RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 COLCA2A8K830 154 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 H3BSH0 61 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 KCNAB3O43448 404 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 OR8G3PP0DMU2 310 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 CD79AP11912 226 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 SCAND1P57086 179 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 ZNF234Q14588 700 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 FNDC3BQ53EP0 1204 aaKnown RBP16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 DCST2Q5T1A1 773 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 LHX8Q68G74 356 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 C5orf46Q6UWT4 87 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 NPEPL1Q8NDH3 523 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 OR5AP2Q8NGF4 316 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 CCDC74AQ96AQ1 378 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 TMEM27Q9HBJ8 222 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 HCFC1R1Q9NWW0 138 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 FRRS1LQ9P0K9 344 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 C5orf52A6NGY3 159 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 FAM171A2A8MVW0 826 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 M0QYG6 137 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 TO15178 435 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 TGM5O43548 720 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 KCNAB1Q14722 419 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 METRNLQ641Q3 311 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 GALNT16Q8N428 558 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 IRF7Q92985 503 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 PTCHD1Q96NR3 888 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 SLC25A21Q9BQT8 299 aaPredicted RBP16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 APOBEC3BQ9UH17 382 aaKnown RBP16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 TRBV5-5A0A0J9YX44 114 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 A0A1B0GTH9 108 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 A0A1B0GWA3 101 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 NDUFS6O75380 124 aaKnown RBP16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 NDUFB2O95178 105 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 RAB3DO95716 219 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 POU3F4P49335 361 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 OR7A5Q15622 319 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 LY6G5CQ5SRR4 150 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 ZCCHC12Q6PEW1 402 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 ZNF765Q7L2R6 523 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 MISPQ8IVT2 679 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 PHOSPHO1Q8TCT1 267 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 GPX8Q8TED1 209 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 MYADMQ96S97 322 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 RNF122Q9H9V4 155 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 TMEM100Q9NV29 134 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 MIOXQ9UGB7 285 aa16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 CDV3Q9UKY7 258 aaKnown RBP16.94■□□□□ 0.3
ECHDC1-214ENST00000474289 MKI67P46013 3256 aaKnown RBP16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 UBE2CO00762 179 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 RDH16O75452 317 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 UPK3AO75631 287 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 HLA-AP01891 365 aaKnown RBP16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 FOLR2P14207 255 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 ALKBH1Q13686 389 aaKnown RBP16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 PEA15Q15121 130 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 HYAL4Q2M3T9 481 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 DEFB115Q30KQ5 88 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 USP53Q70EK8 1073 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 OR4N5Q8IXE1 308 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 ZSCAN1Q8NBB4 408 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 INO80EQ8NBZ0 244 aaPredicted RBP16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 OR10AC1Q8NH08 325 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 CD99L2Q8TCZ2 262 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 ZNF558Q96NG5 402 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 ZNF426Q9BUY5 554 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 PLEKHA6Q9Y2H5 1048 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 COL4A6Q14031 1691 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 NUP210LQ5VU65 1888 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 CACNA1CQ13936 2221 aa16.93■□□□□ 0.3
ECHDC1-214ENST00000474289 FARS2O95363 451 aaKnown RBP16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 LRG1P02750 347 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 AMY2AP04746 511 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 LIPCP11150 499 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 TAS2R19P59542 299 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 ACTBP60709 375 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 ACTG1P63261 375 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 DPTQ07507 201 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 FIGNL1Q6PIW4 674 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 NDUFAF7Q7L592 441 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 OR51A4Q8NGJ6 313 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 EDARADDQ8WWZ3 215 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 TMEM106AQ96A25 262 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 PIK3IP1Q96FE7 263 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 OR51M1Q9H341 326 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 MYOZ1Q9NP98 299 aaPredicted RBP16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 ZNF346Q9UL40 294 aaKnown RBP16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 DTX4Q9Y2E6 619 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 TRBV23-1A0A0A0MS06 115 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 CPED1A4D0V7 1026 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 ZNF705EA8MWA4 302 aaPredicted RBP16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 PQBP1O60828 265 aaKnown RBP16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 SLC35G4P0C7Q5 338 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 PRKXP51817 358 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 BTN3A2P78410 334 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 TRMT12Q53H54 448 aaKnown RBP16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 TMEM205Q6UW68 189 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 SLC43A2Q8N370 569 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 STOML3Q8TAV4 291 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 CPNE2Q96FN4 548 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms