RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 UBE2NP61088 152 aaKnown RBP16.51■□□□□ 0.23
PTCD3-210ENST00000473829 PGGHGQ32M88 737 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 FGD3Q5JSP0 725 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 ARMC4Q5T2S8 1044 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 C1QTNF12Q5T7M4 302 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 LRFN4Q6PJG9 635 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 MYPOPQ86VE0 399 aaPredicted RBP16.51■□□□□ 0.23
PTCD3-210ENST00000473829 IGFN1Q86VF2 1251 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 RNF113BQ8IZP6 322 aaKnown RBP16.51■□□□□ 0.23
PTCD3-210ENST00000473829 LRRC75AQ8NAA5 344 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 NOXO1Q8NFA2 376 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 OR51A7Q8NH64 312 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 PIGTQ969N2 578 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 ZNF566Q969W8 418 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 CLPTM1LQ96KA5 538 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 SEPHS2Q99611 448 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 ACTR3BQ9P1U1 418 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 CRNNQ9UBG3 495 aaPredicted RBP16.51■□□□□ 0.23
PTCD3-210ENST00000473829 TCRBV5S2A0A599 114 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 MCIDASD6RGH6 385 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 CELA3BP08861 270 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 B4GALT1P15291 398 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 MS4A2Q01362 244 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 ALG10Q5BKT4 473 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 SLC22A25Q6T423 547 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 ZNF813Q6ZN06 617 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 TMPRSS11FQ6ZWK6 438 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 ZNF627Q7L945 461 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 ARHGAP24Q8N264 748 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 OR52J3Q8NH60 311 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 FAM46AQ96IP4 442 aaKnown RBP16.5■□□□□ 0.23
PTCD3-210ENST00000473829 SLC38A2Q96QD8 506 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 TNFRSF13CQ96RJ3 184 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 ZNF347Q96SE7 839 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 FOXB1Q99853 325 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 MRPL13Q9BYD1 178 aaKnown RBP16.5■□□□□ 0.23
PTCD3-210ENST00000473829 NOX3Q9HBY0 568 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 CISD1Q9NZ45 108 aaKnown RBP16.5■□□□□ 0.23
PTCD3-210ENST00000473829 ZNF224Q9NZL3 707 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 PRPF19Q9UMS4 504 aaKnown RBP16.5■□□□□ 0.23
PTCD3-210ENST00000473829 MGAT4BQ9UQ53 548 aa16.5■□□□□ 0.23
PTCD3-210ENST00000473829 E7EQL1 145 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 ATP6V1G2-DDX39BF2Z307 99 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 SMPD2O60906 423 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 TRMUO75648 421 aaKnown RBP16.49■□□□□ 0.23
PTCD3-210ENST00000473829 IGLV1-44P01699 117 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 IGHG1P01857 330 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 FABP3P05413 133 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 HOXB1P14653 301 aaPredicted RBP16.49■□□□□ 0.23
PTCD3-210ENST00000473829 ACADSP16219 412 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 OMPP47874 163 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 LIMS1P48059 325 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 DAP3P51398 398 aaKnown RBP16.49■□□□□ 0.23
PTCD3-210ENST00000473829 MYBPC1Q00872 1141 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 SPIBQ01892 262 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 TOP3AQ13472 1001 aaPredicted RBP16.49■□□□□ 0.23
PTCD3-210ENST00000473829 HIST3H3Q16695 136 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 OAFQ86UD1 273 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 SYT14Q8NB59 555 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 SMAP2Q8WU79 429 aaPredicted RBP16.49■□□□□ 0.23
PTCD3-210ENST00000473829 HTRA1Q92743 480 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 HDAC2Q92769 488 aaKnown RBP16.49■□□□□ 0.23
PTCD3-210ENST00000473829 C1orf21Q9H246 121 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 IL1RAPQ9NPH3 570 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 MOKQ9UQ07 419 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 LAMP3Q9UQV4 416 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 POFUT2Q9Y2G5 429 aa16.49■□□□□ 0.23
PTCD3-210ENST00000473829 NPIPB13A6NJU9 1138 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 NPIPB4C9JG80 1138 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 IGKV3-15P01624 115 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 IGHMP01871 453 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 HLA-HP01893 362 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 QDPRP09417 244 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 CECR9P0C854 216 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 ITGA2P17301 1181 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 SLC9A3P48764 834 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 CLRN1P58418 232 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 ADAM8P78325 824 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 LCN8Q6JVE9 175 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 MDP1Q86V88 176 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 ZDHHC21Q8IVQ6 265 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 WFDC11Q8NEX6 87 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 OR4K5Q8NGD3 323 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 TMEM171Q8WVE6 324 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 MCHR2Q969V1 340 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 CCDC124Q96CT7 223 aaKnown RBP16.48■□□□□ 0.23
PTCD3-210ENST00000473829 PERPQ96FX8 193 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 RADILQ96JH8 1075 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 TSPAN32Q96QS1 320 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 GPA33Q99795 319 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 TXNIPQ9H3M7 391 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 B3GNT2Q9NY97 397 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 ZNF346Q9UL40 294 aaKnown RBP16.48■□□□□ 0.23
PTCD3-210ENST00000473829 ARID1AO14497 2285 aa16.48■□□□□ 0.23
PTCD3-210ENST00000473829 TEP1Q99973 2627 aaKnown RBP16.48■□□□□ 0.23
PTCD3-210ENST00000473829 USF3Q68DE3 2245 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 IGKV1D-43A0A0B4J1Z2 117 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 SH3PXD2BA1X283 911 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 DHHO43323 396 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 GADD45GO95257 159 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms