RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 SKP2Q13309 424 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 IL10RAQ13651 578 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 ALKBH1Q13686 389 aaKnown RBP9.93□□□□□ -0.82
C9orf3-214ENST00000473778 SHHQ15465 462 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 GRK1Q15835 563 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 Q499Y3 187 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 ALG10Q5BKT4 473 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 TCTE1Q5JU00 501 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 FAM69AQ5T7M9 428 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 LRRC69Q6ZNQ3 347 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 DND1Q8IYX4 353 aaKnown RBP9.93□□□□□ -0.82
C9orf3-214ENST00000473778 PRSS35Q8N3Z0 413 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 C1orf216Q8TAB5 229 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 RELTQ969Z4 430 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 WBP1Q96G27 269 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 FOXN4Q96NZ1 517 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 DGAT2Q96PD7 388 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 TSPAN32Q96QS1 320 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 C1QTNF6Q9BXI9 259 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 ACTR6Q9GZN1 396 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 S1PR5Q9H228 398 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 NOX3Q9HBY0 568 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 ZNF275Q9NSD4 429 aaPredicted RBP9.93□□□□□ -0.82
C9orf3-214ENST00000473778 PTTG3PQ9NZH4 202 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 PPIEQ9UNP9 301 aaKnown RBP9.93□□□□□ -0.82
C9orf3-214ENST00000473778 KIR2DS5A0A0G2JLQ3 304 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 A0A0G2JNG1 304 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 TRBV5-5A0A0J9YX44 114 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 A0A1B0GUH1 482 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 ELOA3DA6NLF2 546 aaPredicted RBP9.93□□□□□ -0.82
C9orf3-214ENST00000473778 OR4C45A6NMZ5 311 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 B4DGG1 531 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 KIR2DS3K7RE56 304 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 KHDRBS3O75525 346 aaKnown RBP9.93□□□□□ -0.82
C9orf3-214ENST00000473778 RGS11O94810 467 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 SEMA4FO95754 770 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 FCER2P06734 321 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 SDHAP31040 664 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 TAS2R20P59543 309 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 RPL18Q07020 188 aaKnown RBP9.93□□□□□ -0.82
C9orf3-214ENST00000473778 CBFBQ13951 182 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 KIR2DS5Q14953 304 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 C2orf68Q2NKX9 166 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 ELOA3BQ3SY89 546 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 IGSF11Q5DX21 431 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 ELFN2Q5R3F8 820 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 C1QL3Q5VWW1 255 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 ASPHD2Q6ICH7 369 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 TMEM81Q6P7N7 255 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 TMEM184AQ6ZMB5 413 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 GLDNQ6ZMI3 551 aaPredicted RBP9.93□□□□□ -0.82
C9orf3-214ENST00000473778 SLC16A9Q7RTY1 509 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 DPY19L4Q7Z388 723 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 TMPRSS12Q86WS5 348 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 CDC20BQ86Y33 519 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 C10orf53Q8N6V4 93 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 ELOA3Q8NG57 546 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 OR5AK2Q8NH90 309 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 PHOSPHO1Q8TCT1 267 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 THEM6Q8WUY1 208 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 FCAMRQ8WWV6 532 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 PHYHIPQ92561 330 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 CCDC74AQ96AQ1 378 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 MIB2Q96AX9 1013 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 LCORQ96JN0 433 aaPredicted RBP9.93□□□□□ -0.82
C9orf3-214ENST00000473778 USB1Q9BQ65 265 aaKnown RBP9.93□□□□□ -0.82
C9orf3-214ENST00000473778 EVA1AQ9H8M9 152 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 ZNF175Q9Y473 711 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 FKBP7Q9Y680 259 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 PIAS3Q9Y6X2 628 aa9.93□□□□□ -0.82
C9orf3-214ENST00000473778 SPTY2D1-AS1A0A0U1RR47 76 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 ZNF254O75437 659 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 FREM3P0C091 2139 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 VSIG10L2P0DP72 767 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 MAOBP27338 520 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 EFNA3P52797 238 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 TOMM34Q15785 309 aaPredicted RBP9.92□□□□□ -0.82
C9orf3-214ENST00000473778 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.92□□□□□ -0.82
C9orf3-214ENST00000473778 OLFML2AQ68BL7 652 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 PPP1R14AQ96A00 147 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 TMEM106AQ96A25 262 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 S100A16Q96FQ6 103 aaKnown RBP9.92□□□□□ -0.82
C9orf3-214ENST00000473778 ADAD1Q96M93 576 aaKnown RBP9.92□□□□□ -0.82
C9orf3-214ENST00000473778 OR1F2PQ96R84 312 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 NXF5Q9H1B4 397 aaKnown RBP9.92□□□□□ -0.82
C9orf3-214ENST00000473778 SYT4Q9H2B2 425 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 NKX2-4Q9H2Z4 354 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 ASXL3Q9C0F0 2248 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 SHISA7A6NL88 538 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 PYCARD-AS1I3L0S3 204 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 ITGA10O75578 1167 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 POU3F2P20265 443 aaPredicted RBP9.92□□□□□ -0.82
C9orf3-214ENST00000473778 ITPKBP27987 946 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 LCN1P31025 176 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 SLC25A1P53007 311 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 UBE2MP61081 183 aaKnown RBP9.92□□□□□ -0.82
C9orf3-214ENST00000473778 TSPAN5P62079 268 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 BTN1A1Q13410 526 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 HTR4Q13639 388 aa9.92□□□□□ -0.82
C9orf3-214ENST00000473778 COL19A1Q14993 1142 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms