RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 PTNP21246 168 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 GSTM3P21266 225 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 SLC1A3P43003 542 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 SNRPGP62308 76 aaKnown RBP13.39□□□□□ -0.27
LMNA-213ENST00000473598 TSPAN31Q12999 210 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 TOMM34Q15785 309 aaPredicted RBP13.39□□□□□ -0.27
LMNA-213ENST00000473598 ATP1A1-AS1Q5TC04 95 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 ZNF468Q5VIY5 522 aaPredicted RBP13.39□□□□□ -0.27
LMNA-213ENST00000473598 C12orf73Q69YU5 71 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 OR5M10Q6IEU7 315 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 CYP4Z2PQ8N1L4 340 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 GPR119Q8TDV5 335 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 PAQR8Q8TEZ7 354 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 SEC22CQ9BRL7 303 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 SLC19A3Q9BZV2 496 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 ADAM19Q9H013 955 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 OR51E2Q9H255 320 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 RANBP3Q9H6Z4 567 aaPredicted RBP13.39□□□□□ -0.27
LMNA-213ENST00000473598 SH2D2AQ9NP31 389 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 CNIH4Q9P003 139 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 PPP4R1LQ9P1A2 415 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 BAIAP2Q9UQB8 552 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 MED31Q9Y3C7 131 aa13.39□□□□□ -0.27
LMNA-213ENST00000473598 PKD1L2Q7Z442 2459 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 IGLV3-32A0A0A0MS00 114 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 hCG_1807616A0A1W2PRN6 198 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 TMEM8BA6NDV4 472 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 H3BN98 237 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 KLF4O43474 513 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 SLC43A1O75387 559 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 STSP08842 583 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 PNMTP11086 282 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 ITGA3P26006 1051 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 SUMO3P55854 103 aaPredicted RBP13.38□□□□□ -0.27
LMNA-213ENST00000473598 TLE3Q04726 772 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 ST3GAL4Q11206 333 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 SLC30A6Q6NXT4 461 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 LRFN4Q6PJG9 635 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 ATG4DQ86TL0 474 aaPredicted RBP13.38□□□□□ -0.27
LMNA-213ENST00000473598 LSRQ86X29 649 aaPredicted RBP13.38□□□□□ -0.27
LMNA-213ENST00000473598 MEX3DQ86XN8 651 aaKnown RBP13.38□□□□□ -0.27
LMNA-213ENST00000473598 CLRN3Q8NCR9 226 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 DUSP18Q8NEJ0 188 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 OR6M1Q8NGM8 313 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 PFN4Q8NHR9 129 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 ZNF431Q8TF32 576 aaPredicted RBP13.38□□□□□ -0.27
LMNA-213ENST00000473598 THAP4Q8WY91 577 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 SGK3Q96BR1 496 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 MEPEQ9NQ76 525 aaPredicted RBP13.38□□□□□ -0.27
LMNA-213ENST00000473598 MED9Q9NWA0 146 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 CLN6Q9NWW5 311 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 COA4Q9NYJ1 87 aa13.38□□□□□ -0.27
LMNA-213ENST00000473598 CNOT2Q9NZN8 540 aaKnown RBP13.38□□□□□ -0.27
LMNA-213ENST00000473598 EFCAB10A6NFE3 127 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 ANKUB1A6NFN9 424 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 RRP8O43159 456 aaKnown RBP13.37□□□□□ -0.27
LMNA-213ENST00000473598 GATCO43716 136 aaKnown RBP13.37□□□□□ -0.27
LMNA-213ENST00000473598 FPR3P25089 353 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 MSX1P28360 303 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 CTBP2P56545 445 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 GLYR1Q49A26 553 aaPredicted RBP13.37□□□□□ -0.27
LMNA-213ENST00000473598 ZMAT1Q5H9K5 638 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 SLC22A10Q63ZE4 541 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 MZT2BQ6NZ67 158 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 BEST3Q8N1M1 668 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 TEX47Q8TBZ9 253 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 CRELD1Q96HD1 420 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 SGCZQ96LD1 299 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 CHCHD6Q9BRQ6 235 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 CLEC4MQ9H2X3 399 aaPredicted RBP13.37□□□□□ -0.27
LMNA-213ENST00000473598 HHATLQ9HCP6 504 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 C20orf141Q9NUB4 165 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 MCUBQ9NWR8 336 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 ATMQ13315 3056 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 TRAV6A0A075B6T7 132 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 PQLC2LA1A4F0 135 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 ELOA3DA6NLF2 546 aaPredicted RBP13.37□□□□□ -0.27
LMNA-213ENST00000473598 GNB5O14775 395 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 SSX5O60225 188 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 CDC40O60508 579 aaKnown RBP eCLIP13.37□□□□□ -0.27
LMNA-213ENST00000473598 CCL3P10147 92 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 TACR3P29371 465 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 GPR4P46093 362 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 RGS6P49758 472 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 CLDN20P56880 219 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 ELOA3BQ3SY89 546 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 TMEM201Q5SNT2 666 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 LCN1P1Q5VSP4 162 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 PRAMEF20Q5VT98 475 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 C19orf48Q6RUI8 117 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 RTL4Q6ZR62 310 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 CCDC36Q8IYA8 594 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 CDK20Q8IZL9 346 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 ELOA3Q8NG57 546 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 NTNG2Q96CW9 530 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 BPIFA2Q96DR5 249 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 IL4I1Q96RQ9 567 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 ANGPTL4Q9BY76 406 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 DPH1Q9BZG8 443 aa13.37□□□□□ -0.27
LMNA-213ENST00000473598 SLC25A19Q9HC21 320 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms