RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 HACD2Q6Y1H2 254 aa16.91■□□□□ 0.3
COMMD1-208ENST00000472729 PIWIL3Q7Z3Z3 882 aaKnown RBP16.91■□□□□ 0.3
COMMD1-208ENST00000472729 TSPYL5Q86VY4 417 aaPredicted RBP16.91■□□□□ 0.3
COMMD1-208ENST00000472729 VRK1Q99986 396 aaPredicted RBP16.91■□□□□ 0.3
COMMD1-208ENST00000472729 NELFAQ9H3P2 528 aa16.91■□□□□ 0.3
COMMD1-208ENST00000472729 DENND2DQ9H6A0 471 aaPredicted RBP16.91■□□□□ 0.3
COMMD1-208ENST00000472729 MEPEQ9NQ76 525 aaPredicted RBP16.91■□□□□ 0.3
COMMD1-208ENST00000472729 ADA2Q9NZK5 511 aa16.91■□□□□ 0.3
COMMD1-208ENST00000472729 ACANP16112 2415 aa16.9■□□□□ 0.3
COMMD1-208ENST00000472729 B9A039 149 aa16.9■□□□□ 0.3
COMMD1-208ENST00000472729 SERPINA1P01009 418 aa16.9■□□□□ 0.3
COMMD1-208ENST00000472729 IGF2P01344 180 aa16.9■□□□□ 0.3
COMMD1-208ENST00000472729 F13BP05160 661 aa16.9■□□□□ 0.3
COMMD1-208ENST00000472729 SAGP10523 405 aaPredicted RBP16.9■□□□□ 0.3
COMMD1-208ENST00000472729 NR2C1P13056 603 aa16.9■□□□□ 0.3
COMMD1-208ENST00000472729 YAP1P46937 504 aaKnown RBP16.9■□□□□ 0.3
COMMD1-208ENST00000472729 PTDSS1P48651 473 aaKnown RBP16.9■□□□□ 0.3
COMMD1-208ENST00000472729 GALK2Q01415 458 aa16.9■□□□□ 0.3
COMMD1-208ENST00000472729 GKAP1Q5VSY0 366 aaPredicted RBP16.9■□□□□ 0.3
COMMD1-208ENST00000472729 C11orf71Q6IPW1 123 aa16.9■□□□□ 0.3
COMMD1-208ENST00000472729 KCNN2Q9H2S1 579 aa16.9■□□□□ 0.3
COMMD1-208ENST00000472729 SPAG4Q9NPE6 437 aa16.9■□□□□ 0.3
COMMD1-208ENST00000472729 RPS6KA6Q9UK32 745 aa16.9■□□□□ 0.3
COMMD1-208ENST00000472729 FAM32AQ9Y421 112 aaKnown RBP16.9■□□□□ 0.3
COMMD1-208ENST00000472729 NME4O00746 187 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 PDE5AO76074 875 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 QDPRP09417 244 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 CSF3P09919 207 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 OR8G3PP0DMU2 310 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 IFI30P13284 250 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 AQP2P41181 271 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 GSK3BP49841 420 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 EFNA4P52798 201 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 UGT2B15P54855 530 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 PSME3P61289 254 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 RAB1AP62820 205 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 RPL18Q07020 188 aaKnown RBP16.89■□□□□ 0.29
COMMD1-208ENST00000472729 DAG1Q14118 895 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 TRAM2Q15035 370 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 VTCN1Q7Z7D3 282 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 NUP37Q8NFH4 326 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 FAM168AQ92567 244 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 HTRA1Q92743 480 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 TMEM54Q969K7 222 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 BPIFA2Q96DR5 249 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 NDEL1Q9GZM8 345 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 RNF121Q9H920 327 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 FLNAP21333 2647 aaKnown RBP16.89■□□□□ 0.29
COMMD1-208ENST00000472729 USF3Q68DE3 2245 aa16.89■□□□□ 0.29
COMMD1-208ENST00000472729 DHHO43323 396 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 SNX3O60493 162 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 CELA3BP08861 270 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 NPR2P20594 1047 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 PRDX6P30041 224 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 GUCA1AP43080 201 aaPredicted RBP16.88■□□□□ 0.29
COMMD1-208ENST00000472729 GIPRP48546 466 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 GNGT1P63211 74 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 TAF11Q15544 211 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 ZNF730Q6ZMV8 503 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 ZNF627Q7L945 461 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 DPPA2Q7Z7J5 298 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 TREML1Q86YW5 311 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 SLC22A24Q8N4F4 322 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 POM121Q96HA1 1249 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 C20orf141Q9NUB4 165 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 RHCGQ9UBD6 479 aa16.88■□□□□ 0.29
COMMD1-208ENST00000472729 PRR14LQ5THK1 2151 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 IGHV2OR16-5A0A0B4J2B6 119 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 CENPBD1B2RD01 187 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 F12P00748 615 aaPredicted RBP16.87■□□□□ 0.29
COMMD1-208ENST00000472729 PCSK6P29122 969 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 CALCRP30988 508 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 ADIPOQQ15848 244 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 CARTPTQ16568 116 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 SLC36A2Q495M3 483 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 ALG10Q5BKT4 473 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 KRT80Q6KB66 452 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 TMEM53Q6P2H8 277 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 NHLRC1Q6VVB1 395 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 CBLL1Q75N03 491 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 OAFQ86UD1 273 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 SYT14Q8NB59 555 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 MAPK1IP1LQ8NDC0 245 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 HSH2DQ96JZ2 352 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 RAB1BQ9H0U4 201 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 PLK3Q9H4B4 646 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 ZNF442Q9H7R0 627 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 DYNLRB1Q9NP97 96 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 A4GNTQ9UNA3 340 aa16.87■□□□□ 0.29
COMMD1-208ENST00000472729 SETD2Q9BYW2 2564 aaPredicted RBP16.87■□□□□ 0.29
COMMD1-208ENST00000472729 RAI1Q7Z5J4 1906 aaPredicted RBP16.86■□□□□ 0.29
COMMD1-208ENST00000472729 PTHP01270 115 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 PGA4P0DJD7 388 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 PGA3P0DJD8 388 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 ACADSP16219 412 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 THBS4P35443 961 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 RPS23P62266 143 aaKnown RBP16.86■□□□□ 0.29
COMMD1-208ENST00000472729 MXRA7P84157 204 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 PLP2Q04941 152 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 SNTB2Q13425 540 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms